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Develop a novel model for the analysis of single-cell ATAC-seq data to embed cells, genomic regions, and DNA sequences in the same space. Assess the feasibility of cross-species embedding. Expand the application of CellSpace to other single-cell -omics data, including multi-omics data.

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MSKCC

06/20 - 08/20 Mentor: Zakieh Tayyebi, Christina Leslie

Embedding co-assay data in the same space using StarSpace

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Develop a novel model for the analysis of single-cell ATAC-seq data to embed cells, genomic regions, and DNA sequences in the same space. Assess the feasibility of cross-species embedding. Expand the application of CellSpace to other single-cell -omics data, including multi-omics data.

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