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1. ConsTADs ConsTADs Public

   Topologically associating domains (TADs) have emerged as basic structural and functional units of genome organization, and have been determined by many computational methods from Hi-C contact maps.…

   Jupyter Notebook 1

2. diHMM-cpp diHMM-cpp Public

   Forked from XuanCao-CX/diHMM-cpp

   Improved implementation of diHMM in C++

   Makefile

3. scHiC_notes scHiC_notes Public

   Forked from mdozmorov/scHiC_notes

   Notes on single-cell Hi-C technologies, tools, and data

4. HiC_tools HiC_tools Public

   Forked from mdozmorov/HiC_tools

   A collection of tools for Hi-C data analysis

5. HiC_data HiC_data Public

   Forked from mdozmorov/HiC_data

   A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

6. STAGE STAGE Public

   Forked from zhanglabtools/STAGE

   Jupyter Notebook