Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clean cgal utilities #14097

Merged
merged 1 commit into from
Aug 24, 2022
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Jump to
Jump to file
Failed to load files.
Diff view
Diff view
17 changes: 17 additions & 0 deletions include/deal.II/base/quadrature_lib.h
Original file line number Diff line number Diff line change
Expand Up @@ -642,6 +642,23 @@ class QSimplex : public Quadrature<dim>
Quadrature<spacedim>
compute_affine_transformation(
const std::array<Point<spacedim>, dim + 1> &vertices) const;

/**
*
* Given a partition of a cell into simplices, this function creates a
* quadrature rule on the cell by collecting Quadrature objects on each
* simplex. A simplex is identified by its vertices, which are stored into an
* array of Points. Hence, this function can provide quadrature rules on
* polygons (or polyhedra), as they can be split into simplices.
*
*
* @param simplices A std::vector where each entry is an array of `dim+1` points, which identifies the vertices of a simplex.
* @return A Quadrature object on the cell.
*/
template <int spacedim = dim>
Quadrature<spacedim>
mapped_quadrature(
const std::vector<std::array<Point<spacedim>, dim + 1>> &simplices) const;
};

/**
Expand Down
83 changes: 17 additions & 66 deletions include/deal.II/cgal/utilities.h
Original file line number Diff line number Diff line change
Expand Up @@ -410,66 +410,22 @@ namespace CGALWrappers

constexpr int spacedim =
CGALTriangulationType::Point::Ambient_dimension::value;
QGaussSimplex<spacedim> quad(degree);
std::vector<dealii::Point<spacedim>> pts;
std::vector<double> wts;
std::array<dealii::Point<spacedim>, spacedim + 1> vertices; // tets
std::vector<std::array<dealii::Point<spacedim>, spacedim + 1>>
vec_of_simplices; // tets

const auto is_c3t3 = boost::hana::is_valid(
[](auto &&obj) -> decltype(obj.cells_in_complex_begin()) {});

const auto is_tria3 = boost::hana::is_valid(
[](auto &&obj) -> decltype(obj.finite_cell_handles()) {});

if constexpr (decltype(is_c3t3(tria)){})
{
for (auto iter = tria.cells_in_complex_begin();
iter != tria.cells_in_complex_end();
++iter)
{
for (unsigned int i = 0; i < (spacedim + 1); ++i)
{
vertices[i] = cgal_point_to_dealii_point<spacedim>(
iter->vertex(i)->point());
}

auto local_quad = quad.compute_affine_transformation(vertices);
std::transform(local_quad.get_points().begin(),
local_quad.get_points().end(),
std::back_inserter(pts),
[&pts](const auto &p) { return p; });
std::transform(local_quad.get_weights().begin(),
local_quad.get_weights().end(),
std::back_inserter(wts),
[&wts](const double w) { return w; });
}
}
else if constexpr (decltype(is_tria3(tria)){})
std::array<dealii::Point<spacedim>, spacedim + 1> simplex;
for (const auto &f : tria.finite_cell_handles())
{
for (const auto &f : tria.finite_cell_handles())
for (unsigned int i = 0; i < (spacedim + 1); ++i)
{
for (unsigned int i = 0; i < (spacedim + 1); ++i)
{
vertices[i] =
cgal_point_to_dealii_point<spacedim>(f->vertex(i)->point());
}

auto local_quad = quad.compute_affine_transformation(vertices);
std::transform(local_quad.get_points().begin(),
local_quad.get_points().end(),
std::back_inserter(pts),
[&pts](const auto &p) { return p; });
std::transform(local_quad.get_weights().begin(),
local_quad.get_weights().end(),
std::back_inserter(wts),
[&wts](const double w) { return w; });
simplex[i] =
cgal_point_to_dealii_point<spacedim>(f->vertex(i)->point());
}

vec_of_simplices.push_back(simplex);
}
else
{
Assert(false, ExcMessage("Not a valid CGAL Triangulation."));
}
return Quadrature<spacedim>(pts, wts);

return QGaussSimplex<spacedim>(degree).mapped_quadrature(vec_of_simplices);
}


Expand Down Expand Up @@ -506,26 +462,21 @@ namespace CGALWrappers
{
using K = CGAL::Exact_predicates_inexact_constructions_kernel;
using CGALPoint = CGAL::Point_3<K>;
using CGALTriangulation = CGAL::Triangulation_3<K>;
CGAL::Surface_mesh<CGALPoint> surface_1, surface_2, out_surface;
dealii_cell_to_cgal_surface_mesh(cell0, mapping0, surface_1);
dealii_cell_to_cgal_surface_mesh(cell1, mapping1, surface_2);
// They have to be triangle meshes
CGAL::Polygon_mesh_processing::triangulate_faces(surface_1);
CGAL::Polygon_mesh_processing::triangulate_faces(surface_2);
Assert(CGAL::is_triangle_mesh(surface_1),
Assert(CGAL::is_triangle_mesh(surface_1) &&
CGAL::is_triangle_mesh(surface_2),
ExcMessage("The surface must be a triangle mesh."));
compute_boolean_operation(surface_1, surface_2, bool_op, out_surface);

using Mesh_domain = CGAL::Polyhedral_mesh_domain_with_features_3<
K,
CGAL::Surface_mesh<CGALPoint>>;
using Tr = typename CGAL::Mesh_triangulation_3<Mesh_domain,
CGAL::Default,
ConcurrencyTag>::type;
using Mesh_criteria = CGAL::Mesh_criteria_3<Tr>;
using C3t3 = CGAL::Mesh_complex_3_in_triangulation_3<Tr>;
C3t3 tria;
cgal_surface_mesh_to_cgal_triangulation(out_surface, tria);
CGALTriangulation tria;
tria.insert(out_surface.points().begin(), out_surface.points().end());

return compute_quadrature(tria, degree);
}
}
Expand Down
53 changes: 53 additions & 0 deletions source/base/quadrature_lib.cc
Original file line number Diff line number Diff line change
Expand Up @@ -1260,6 +1260,36 @@ QSimplex<dim>::compute_affine_transformation(



template <int dim>
template <int spacedim>
Quadrature<spacedim>
QSimplex<dim>::mapped_quadrature(
const std::vector<std::array<Point<spacedim>, dim + 1>> &simplices) const
{
Assert(!(dim == 1 && spacedim == 1),
ExcMessage("This function is not supposed to work in 1D-1D case."));
Assert(dim <= spacedim,
ExcMessage("Invalid combination of dim and spacedim ."));

std::vector<Point<spacedim>> qp;
std::vector<double> ws;
for (const auto &simplex : simplices)
{
const auto rule = this->compute_affine_transformation(simplex);
std::transform(rule.get_points().begin(),
rule.get_points().end(),
std::back_inserter(qp),
[&](const Point<spacedim> &p) { return p; });
std::transform(rule.get_weights().begin(),
rule.get_weights().end(),
std::back_inserter(ws),
[&](const double w) { return w; });
}
return Quadrature<spacedim>(qp, ws);
}



QTrianglePolar::QTrianglePolar(const Quadrature<1> &radial_quadrature,
const Quadrature<1> &angular_quadrature)
: QSimplex<2>(Quadrature<2>())
Expand Down Expand Up @@ -2227,3 +2257,26 @@ namespace dealii
QSimplex<2>::compute_affine_transformation(
const std::array<Point<3>, 2 + 1> &vertices) const;
} // namespace dealii

namespace dealii
{
template Quadrature<2>
QSimplex<1>::mapped_quadrature(
const std::vector<std::array<Point<2>, 1 + 1>> &simplices) const;

template Quadrature<3>
QSimplex<1>::mapped_quadrature(
const std::vector<std::array<Point<3>, 1 + 1>> &simplices) const;

template Quadrature<2>
QSimplex<2>::mapped_quadrature(
const std::vector<std::array<Point<2>, 2 + 1>> &simplices) const;

template Quadrature<3>
QSimplex<2>::mapped_quadrature(
const std::vector<std::array<Point<3>, 2 + 1>> &simplices) const;

template Quadrature<3>
QSimplex<3>::mapped_quadrature(
const std::vector<std::array<Point<3>, 3 + 1>> &simplices) const;
} // namespace dealii
18 changes: 5 additions & 13 deletions tests/cgal/cgal_quadrature_01.cc
Original file line number Diff line number Diff line change
Expand Up @@ -30,19 +30,11 @@

// Compute volumes by splitting polyhedra into simplices.

using K = CGAL::Exact_predicates_inexact_constructions_kernel;
using CGALPoint = CGAL::Point_3<K>;
using K = CGAL::Exact_predicates_inexact_constructions_kernel;
using CGALPoint = CGAL::Point_3<K>;
using CGALTriangulation = CGAL::Triangulation_3<K>;
using namespace CGALWrappers;
using Mesh_domain =
CGAL::Polyhedral_mesh_domain_with_features_3<K,
CGAL::Surface_mesh<CGALPoint>>;
using Tr = typename CGAL::
Mesh_triangulation_3<Mesh_domain, CGAL::Default, ConcurrencyTag>::type;

using Mesh_criteria = CGAL::Mesh_criteria_3<Tr>;
using C3t3 = CGAL::Mesh_complex_3_in_triangulation_3<Tr,
Mesh_domain::Corner_index,
Mesh_domain::Curve_index>;


void
Expand All @@ -55,13 +47,13 @@ test()
SOURCE_DIR
"/input_grids/octahedron.off"};
CGAL::Surface_mesh<CGALPoint> sm;
C3t3 tria;
CGALTriangulation tria;
constexpr int degree = 3;
for (const auto &name : fnames)
{
std::ifstream input(name);
input >> sm;
cgal_surface_mesh_to_cgal_triangulation(sm, tria);
tria.insert(sm.points().begin(), sm.points().end());
auto b = compute_quadrature(tria, degree);
deallog << "Volume of poly with Quadrature: " << std::setprecision(12)
<< std::accumulate(b.get_weights().begin(),
Expand Down