PYthon CAviar Solutions SOftware Suite

Components

Pycassos offers a graphical user interface to all bioinformatics components developed by Digital Caviar Solutions.

• genairics: raw data analysis
• bidali: advanced processing and biological inference
• pyni: network inference package
• leopard: lab reporting package

Build and run pycassos with Docker

docker build -t pycassos https://github.com/dicaso/pycassos.git
docker run -it pycassos

Acknowledgments

Open source projects

This project would not have been possible if it could not rely on the work of many other open source projects. It would be too many to list here, but they can be found by looking at the setup.py files of the different dicaso components.

dicaso development

Software engineers

• Christophe Van Neste, PhD (principal software engineer)
• pyni:
  • Lieven Verbeke, PhD

Beta testers

• genairics:
  • Bieke Decaesteker
  • Jolien De Wyn
• bidali:
  • Jolien Dewyn
  • Carolina Nunes
• pyni:
  • Carolina Nunes

Funding agencies

• Ghent University
• FWO