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RO-Crate reporting #1

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douglowe opened this issue May 10, 2024 · 2 comments
Open

RO-Crate reporting #1

douglowe opened this issue May 10, 2024 · 2 comments
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enhancement New feature or request

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@douglowe
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This is an issue for creating an RO-Crate report option, as an alternative to the html report option.

@douglowe douglowe added the enhancement New feature or request label May 10, 2024
@douglowe douglowe self-assigned this May 10, 2024
@douglowe
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douglowe commented May 10, 2024

Actions:

  • duplicate tests/test_report directory, to tests/test_report_rocrate, and create example ro-crate in that directory
  • add function test_report_rocrate to tests/tests.py
  • add ro-crate libraries to testing environment
  • follow trail from create_report in snakemake/api.py to find where we can branch to new report functionality
  • inside snakemake/report create rocrate_reporter directory
  • plan out rocrate reporting functions

@stain
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stain commented Jun 4, 2024

@douglowe investigating the different profiles for workflow (plan+execution)s in RO-Crate. Considering making a template crate that can then be added onto with workflow outputs.

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