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{bio}[foss/2022b] NanoPlot 1.41.0 #20340

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47 changes: 47 additions & 0 deletions easybuild/easyconfigs/n/NanoPlot/NanoPlot-1.41.0-foss-2022b.eb
Original file line number Diff line number Diff line change
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# Author: Pavel Grochal (INUITS)
# License: GPLv2

easyblock = 'PythonPackage'

name = 'NanoPlot'
version = '1.41.0'

homepage = 'https://github.com/wdecoster/NanoPlot'
description = "Plotting suite for long read sequencing data and alignments"

toolchain = {'name': 'foss', 'version': '2022b'}

sources = [SOURCE_TAR_GZ]
checksums = ['8508ab60354d4f0d674d3c431a567908f5bb4fc5e406974e5c8190cabd6199ac']

dependencies = [
('Python', '3.10.8'),
('SciPy-bundle', '2023.02'),
('Biopython', '1.81'),
('Pysam', '0.21.0'),
('nanomath', '1.3.0'),
('nanoget', '1.18.1'),
('Seaborn', '0.12.2'),
('plotly.py', '5.13.1'),
('pauvre', '0.2.3'),
('statsmodels', '0.14.0'),
('Arrow', '11.0.0'), # for pyarrow
('Kaleido', '0.2.1'),
]

download_dep_fail = True
use_pip = True

# replace strict Seaborn & pauvre version requirement with minimal version requirements
preinstallopts = "sed -i 's/==0/>=0/g' setup.py && "

sanity_check_paths = {
'files': ['bin/NanoPlot'],
'dirs': ['lib/python%(pyshortver)s/site-packages'],
}

sanity_check_commands = ["NanoPlot --help"]

sanity_pip_check = True

moduleclass = 'bio'
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