nnUNet_models

Trained models for nnUNet v1.

How to Download Models

Models can be downloaded from GitHub using LFS. If LFS is disabled (monthly bandwidth reached), then you can also download the models from Box.com: https://duke.box.com/v/ecalabr-nnUNet-models

Citation

Please cite the following articles if you use one of these models:

T1-weighted postcontrast enhancement (Task 501): https://doi.org/10.1093/neuonc/noad261

BraTS meningioma (Tasks 90X): https://doi.org/10.48550/arXiv.2305.07642

Neonatal brain masking (Tasks 40X): under review, please check back later

Installation

nnUNet_install_pretrained_model_from_zip <model.zip>

Usage

Please refer to the nnUNet v1 docs: https://github.com/MIC-DKFZ/nnUNet/tree/nnunetv1