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Steps to Reproduce
Expected behavior It is anticipated that the entire file should be processed without any exceptions.
Actual behavior An exception is encountered with one molecule, effectively halting the indexing process for the subsequent content in the file.
Attachments Example of error:
Indigo/Bingo version Indigo version: 1.14.0-rc.1.0
Aditional Context I've created the test, which reproduces that behavior - link The way to run that test:
The text was updated successfully, but these errors were encountered:
This issue is fixed on #1742
To skip all errors when helpers.iterate_sdf is used, you need to pass error_handler.
helpers.iterate_sdf
error_handler
For example:
from bingo_elastic.elastic import ElasticRepository, IndexName from bingo_elastic.model import helpers, record sdf = helpers.iterate_sdf("data/big_test.sdf", error_handler=record.skip_errors) ElasticRepository( IndexName.BINGO_CUSTOM, host="localhost", port=9200 ).index_records(sdf)
Sorry, something went wrong.
#1425 - Indexing of a substantial quantity of molecules instigates th…
63d53bf
…e indexing process for the entire file (#1742)
Fixed as per @AlexanderSavelyev report
khyurri
Successfully merging a pull request may close this issue.
Steps to Reproduce
Expected behavior
It is anticipated that the entire file should be processed without any exceptions.
Actual behavior
An exception is encountered with one molecule, effectively halting the indexing process for the subsequent content in the file.
Attachments
Example of error:
Indigo/Bingo version
Indigo version: 1.14.0-rc.1.0
Aditional Context
I've created the test, which reproduces that behavior - link
The way to run that test:
The text was updated successfully, but these errors were encountered: