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Pinned repositories

  1. genotype-files-manipulations

    Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.

    Python 2

  2. phasing-genomes

    Pipeline to phase a genome into two homeologous subgenomes. Parental genomes are required.

    Python 3

  3. allele-specific-expression

    Forked from daskelly/ase

    Pipeline to perform the allele-specific expression analysis developed by Skelly et al. (2011) on phased data.

    R 3

  4. population-genetic-analyses

    Set of tools to perform various population genetic analyses on genomic data

    Python 1

  5. phylogenetic-analyses

    Scripts to perform various phylogenetic analyses on genomic data


  6. genomic-analyses_in_apache-spark

    Scrips and pipelines for genomic analyses in Apache Spark, an open-source cluster-computing framework for big data processing.

    Python 1

79 contributions in the last year

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