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  • Federal University of Rio de Janeiro
  • Rio de Janeiro, RJ, Brazil
  • X @filiperomero2

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  1. ViralUnity ViralUnity Public

    ViralUnity is an integrated pipeline designed for comprehensive data quality control, metagenomic analysis, and reference assembly of viral genomes. It streamlines the process of handling viral gen…

    Python 3

  2. SC2_lineage_B.1.1.7_in_Brazil SC2_lineage_B.1.1.7_in_Brazil Public

    Data and code for a genomic epidemiology on the spread of SARS-CoV-2 lineage B.1.1.7 in Brazil. See: https://virological.org/t/emergence-and-spread-of-sars-cov-2-lineage-b-1-1-7-in-brazil/638

    Shell 1

  3. Genomic_Surveillance_in_Belo_Horizonte Genomic_Surveillance_in_Belo_Horizonte Public

    This repo contains data and results of our ongoing genomic epidemiology study in Belo Horizonte. Any doubts, please refer to myself (filiperomero@gmail.com) or Dr. Renato Santana de Aguiar (santana…

  4. Get_IDT_input Get_IDT_input Public

    This repo contains a simple python script to generate fasta files with a specific format required by IDT to perform primer desing with rhAmp technology.

    Python

  5. RT-Metagenomics RT-Metagenomics Public

    This repo contains code and test data for RT-Meta, an app for real time metagenomic analysis with nanopore sequecing data.

    JavaScript

  6. CHIKV_RJ_2015-2018 CHIKV_RJ_2015-2018 Public

    This repository contains data, code and results of a research project on the epidemiology of Chikungunya virus in Rio de Janeiro between 2015 and 2018 (https://doi.org/10.1101/2023.04.12.23288482).

    R