genomic_tools

Set of scripts for processing genomic data

Notes:

Name		Name	Last commit message	Last commit date
Latest commit History 19 Commits
0_run_split_vcf.sh		0_run_split_vcf.sh
LICENSE		LICENSE
PEER.R		PEER.R
README.md		README.md
bcftools_split_vcf_by_chr.sh		bcftools_split_vcf_by_chr.sh
convert2dosages.sh		convert2dosages.sh
convert_vcf2bed.sh		convert_vcf2bed.sh
convert_vcf_to_dosage.py		convert_vcf_to_dosage.py
do_expression_normalization.py		do_expression_normalization.py
dosages_to_vcf.py		dosages_to_vcf.py
extract_tissue_samples_from_gtexportal_gct.ipynb		extract_tissue_samples_from_gtexportal_gct.ipynb
fast_filter_missings.sh		fast_filter_missings.sh
filter_vcf_snps.py		filter_vcf_snps.py
gct_samples_selection_README.txt		gct_samples_selection_README.txt
gtex_normalization.py		gtex_normalization.py
run_fast_split_vcf_by_chr.sh		run_fast_split_vcf_by_chr.sh
select_samples_from_tissue.py		select_samples_from_tissue.py
select_samples_from_vcf.py		select_samples_from_vcf.py
split_vcf_in_chr.py		split_vcf_in_chr.py

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