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  1. abcwcm/GeartySchietinger abcwcm/GeartySchietinger Public

    Scripts related to bulkRNA-seq as well as single-cell CITE-seq and VDJ-seq data of Gearty et al. (2021)

    HTML 4 4

  2. abcwcm/Scott2019 abcwcm/Scott2019 Public

    Code and data for the bulk RNA-seq and bulk ATAC-seq data of tumor-infiltrating CD8 T cells (and controls) as published in Scott et al., Nature (2019).

    Makefile

  3. abcwcm/Chandran2021 abcwcm/Chandran2021 Public

    Code and access to data related to the SIFT-seq publication by Chandran et al., Nature Medicine (2022)

    HTML 1

  4. Notes Notes Public

    Personal notes about work- and coding-related topics

    R 17 9

  5. deeptools/deepTools deeptools/deepTools Public

    Tools to process and analyze deep sequencing data.

    Python 661 205

  6. SingleR-inc/SingleR SingleR-inc/SingleR Public

    Clone of the Bioconductor repository for the SingleR package.

    R 165 19