IP4GS

IP4GS, an interactive platform for genomic selection, offers a user-friendly interface for performing streamlined GS analysis involving the above-mentioned steps simply through point-and-click actions. IP4GS currently includes seven commonly used models, 11 evaluation metrics, and visualization modules, offering great convenience for plant breeders with limited bioinformatics knowledge to apply GS analysis.

Quick start

1. Upload data

2. Genotypic data filtration and input data preview

3. Data visualization console and dimension reduction console

4. Preview of DR data

5. Genotype-to-phenotype prediction

6. Viewing scatter plots of observed and predicted phenotypes

Local usage

1. Download UI and server scripts of IP4GS

2. Source UI and sever scripts

3. Install all dependence package in the scripts

4. Library all packages and run IP4GS

shinyApp(options = list(launch.browser=T),ui = UI,server = server)