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add state & copy number support to specification #23

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reece opened this issue Jun 2, 2018 · 1 comment
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add state & copy number support to specification #23

reece opened this issue Jun 2, 2018 · 1 comment
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reece commented Jun 2, 2018 •
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Per discussions in Toronto

Board shots: https://photos.app.goo.gl/XOUcdMs2GXvAEJyV2

General idea:

  • define a new State object. Attributes are something like: location_id, exact: T/F/Unk, copies (interval)
  • State instance may be used as an Allele state (in addition to current sequence support). This enables an expression of copy number of unknown location
@reece reece added this to the 0.4 milestone Jun 2, 2018
@reece reece mentioned this issue Sep 17, 2018
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@reece reece removed this from the 0.6 milestone Oct 23, 2018
@reece reece added the CNV label May 6, 2019
@reece reece mentioned this issue May 6, 2019
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@reece reece added the Duplicate label May 6, 2019
@ga4gh ga4gh locked and limited conversation to collaborators May 6, 2019
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reece commented May 6, 2019

Please use #46 for a consolidated discussion of CNV requirements.

@reece reece closed this as completed May 6, 2019
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