This repository contains a collection of commonly used wrappers/scripts/preprocessing scripts for the genomic/metagenomic analysis.
Download this repository and install it using pip3
git clone https://github.com/gaarangoa/genomic-scripts.git
cd genomic-scripts
pip3 install . --user
genetools --help
Usage: genetools [OPTIONS] COMMAND [ARGS]...
Gene Tools: Is a suit of scripts useful for the manipulation of NGS and genomics data.
Author(s): Gustavo Arango (gustavo1@vt.edu)
Usage: genetools --help
Options:
--help Show this message and exit.
Commands:
mutate Mutate a nucleotide sequence: