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TTRate Package

Tasks

  • Meeting where we write the API together
  • Create Unit testing from beginning (rcmd check ->bioconductor)
    • use subset of Livias data for demo and unit test. Don't use Ohlers data
  • Set up plotting using exon plotting, have a look at JunctionSeq package and paper
  • Make gene-fit plots loke in pombe paper
  • Use FPKM/min for synthesis rate

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