Merge pull request #628 from sachiwee/Galacticus_Msigma #1004
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| name: 'CI/CD' | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| push: | |
| branches: | |
| - 'master' | |
| paths: | |
| - 'Makefile' | |
| - 'source/**' | |
| - 'source/Bivar/**' | |
| - 'source/ISO_Varying_String/**' | |
| - 'source/gslODEInitVal2/**' | |
| - 'source/NSWC/**' | |
| - 'source/pFq/**' | |
| - 'source/gslSpecFuncApprox/**' | |
| - 'source/FFTlog/**' | |
| - 'perl/**' | |
| - 'perl/File/**' | |
| - 'perl/Galacticus/**' | |
| - 'perl/Galacticus/Launch/**' | |
| - 'perl/Galacticus/Constraints/**' | |
| - 'perl/Galacticus/Build/**' | |
| - 'perl/Galacticus/Build/Components/**' | |
| - 'perl/Galacticus/Build/Components/Classes/**' | |
| - 'perl/Galacticus/Build/Components/Implementations/**' | |
| - 'perl/Galacticus/Build/Components/Properties/**' | |
| - 'perl/Galacticus/Build/Components/TreeNodes/**' | |
| - 'perl/Galacticus/Build/Components/Hierarchy/**' | |
| - 'perl/Galacticus/Build/SourceTree/**' | |
| - 'perl/Galacticus/Build/SourceTree/Parse/**' | |
| - 'perl/Galacticus/Build/SourceTree/Analyze/**' | |
| - 'perl/Galacticus/Build/SourceTree/Process/**' | |
| - 'perl/Galacticus/Build/SourceTree/Process/FunctionClass/**' | |
| - 'perl/List/**' | |
| - 'perl/Sort/**' | |
| - 'perl/LaTeX/**' | |
| - 'perl/IO/**' | |
| - 'perl/IO/Compress/**' | |
| - 'perl/System/**' | |
| - 'perl/Fortran/**' | |
| - 'scripts/build/**' | |
| - 'schema/**' | |
| concurrency: | |
| group: cicd-${{ github.ref }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| # Build and deploy | |
| ## Linux | |
| ### Static executable and test codes | |
| Build-Executable-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Check out repository analysis-perl | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: galacticusorg/analysis-perl | |
| path: analysis-perl | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_FCFLAGS=$GALACTICUS_FCFLAGS -static" >> $GITHUB_ENV | |
| echo "GALACTICUS_ANALYSIS_PERL_PATH=$GITHUB_WORKSPACE/analysis-perl" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| export BUILDPATH=./work/build | |
| set -o pipefail | |
| make GALACTICUS_BUILD_OPTION=compileprof -j4 all 2>&1 | tee build.log | |
| set +o pipefail | |
| chmod u=wrx ./scripts/build/buildProfiler.pl | |
| ./scripts/build/buildProfiler.pl build.log buildProfile.html --durationMinimum 20 | |
| grep -vqzi error: build.log || (echo "FAIL: errors found in build.log" && false) | |
| grep -vqzi warning: build.log || (echo "FAIL: warnings found in build.log" && false) | |
| grep -vqzi 'is up to date' build.log || (echo "FAIL: 'is up to date' found in build.log" && false) | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec | |
| path: 'Galacticus.exe' | |
| - name: Upload test code executables | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-execs | |
| path: 'tests.*.exe' | |
| - name: Upload build profile | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: build-profile | |
| path: 'buildProfile.html' | |
| - name: Test preprocessor determinism | |
| run: | | |
| # Test that the preprocessor produces deterministic output by re-preprocessing one file and checking that the results are unchanged. | |
| cd $GALACTICUS_EXEC_PATH | |
| cp work/build/mass_distributions.p.F90 work/build/mass_distributions.p.F90.prev | |
| cp work/build/mass_distributions.spherical.Sersic.p.F90 work/build/mass_distributions.spherical.Sersic.p.F90.prev | |
| touch source/mass_distributions.spherical.Sersic.F90 | |
| make -j16 work/build/mass_distributions.p.F90 | |
| cmp -s work/build/mass_distributions.p.F90 work/build/mass_distributions.p.F90.prev | |
| cmp -s work/build/mass_distributions.spherical.Sersic.p.F90 work/build/mass_distributions.spherical.Sersic.p.F90.prev | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Non-static executable | |
| Build-Executable-Linux-Non-Static: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Check out repository analysis-perl | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: galacticusorg/analysis-perl | |
| path: analysis-perl | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_ANALYSIS_PERL_PATH=$GITHUB_WORKSPACE/analysis-perl" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| export BUILDPATH=./work/build | |
| set -o pipefail | |
| make -j4 Galacticus.exe 2>&1 | tee build.log | |
| set +o pipefail | |
| ! grep -n Error: build.log | |
| ! grep -n Warning: build.log | |
| ! grep -v 'is up to date' build.log | grep -n -C 5 make: | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec-non-static | |
| path: 'Galacticus.exe' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Executable instrumented | |
| Build-Executables-Instrumented-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_DATA_PATH=$GITHUB_WORKSPACE/datasets" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| export GALACTICUS_FCFLAGS="$GALACTICUS_FCFLAGS -pg" | |
| export GALACTICUS_CFLAGS="$GALACTICUS_CFLAGS -pg" | |
| export GALACTICUS_CPPFLAGS="$GALACTICUS_CPPFLAGS -pg" | |
| make -j4 Galacticus.exe | |
| - name: Upload executables | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec-instrumented | |
| path: 'Galacticus.exe' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Executable MPI | |
| Build-Executables-MPI-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_DATA_PATH=$GITHUB_WORKSPACE/datasets" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| make -j4 GALACTICUS_BUILD_OPTION=MPI Galacticus.exe tests.MPI.exe tests.radiative_transfer.atomic_matter.state_solver.exe | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec-MPI | |
| path: 'Galacticus.exe' | |
| - name: Upload test code executables | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-execs-MPI | |
| path: 'tests.*.exe' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Executable debugging | |
| Build-Executables-Debugging-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_DATA_PATH=$GITHUB_WORKSPACE/datasets" >> $GITHUB_ENV | |
| echo "GALACTICUS_FCFLAGS+=\ -DDEBUGGING" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| make -j4 Galacticus.exe tests.debugging.exe | |
| - name: Upload test code executables | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-execs-debugging | |
| path: 'tests.*.exe' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Library | |
| Build-Library-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| - name: Build the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| make -j4 GALACTICUS_BUILD_OPTION=lib libgalacticus.so | |
| - name: Package the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| mkdir galacticus | |
| mkdir galacticus/lib | |
| mkdir galacticus/python | |
| # Find all dynamic libraries needed (filtering out some system libs) and copy to our folder. | |
| ldd libgalacticus.so | awk '{if (NF == 4) print $3}' | grep -v -e /libc.so -e /libdl.so -e /libm.so -e /libpthread.so -e /librt.so | xargs -n 1 -i{} cp {} galacticus/lib/ | |
| mv galacticus.py galacticus/python/ | |
| mv libgalacticus.so galacticus/lib/ | |
| tar cvfj libgalacticus.tar.bz2 galacticus | |
| - name: Upload library | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-library | |
| path: 'libgalacticus.tar.bz2' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Docker image | |
| Build-Docker-Linux: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| packages: write | |
| steps: | |
| - name: "Detect PR build" | |
| id: detectBranch | |
| run: | | |
| if [[ "${{ github.event_name }}" == "pull_request" ]]; then | |
| echo Running on a PR - will build, but not push | |
| echo "doPush=false" >> "$GITHUB_OUTPUT" | |
| else | |
| echo Running on a non-PR - will build and push | |
| echo "doPush=true" >> "$GITHUB_OUTPUT" | |
| fi | |
| - name: Login to GitHub Container Registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.repository_owner }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Extract metadata (tags, labels) for Docker | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: galacticusorg/galacticus | |
| - name: Build and push Docker image | |
| uses: docker/build-push-action@v5 | |
| with: | |
| push: ${{ steps.detectBranch.outputs.doPush }} | |
| tags: ghcr.io/galacticusorg/galacticus:latest | |
| labels: ${{ steps.meta.outputs.labels }} | |
| ### Documentation | |
| Build-Documentation-Linux: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| - name: Build the docs | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| ./scripts/doc/Build_Documentation.sh -f yes -p 2 | |
| - name: Upload docs | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-docs | |
| path: | | |
| ./doc/Galacticus_Usage.pdf | |
| ./doc/Galacticus_Physics.pdf | |
| ./doc/Galacticus_Development.pdf | |
| ./doc/Galacticus_Source.pdf | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ### Tools | |
| Build-Tools: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| needs: Build-Executable-Linux | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Check out repository datasets | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: galacticusorg/datasets | |
| path: datasets | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "GALACTICUS_DATA_PATH=$GITHUB_WORKSPACE/datasets" >> $GITHUB_ENV | |
| echo "GALACTICUS_FCFLAGS+=\ -static" >> $GITHUB_ENV | |
| - name: Download executables | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-exec | |
| - name: Build tools | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| mkdir -p $GALACTICUS_DATA_PATH/dynamic | |
| chmod u=wrx ./Galacticus.exe | |
| ./Galacticus.exe parameters/buildTools.xml | |
| cd $GALACTICUS_DATA_PATH | |
| classVersion=`awk '{if ($1 == "class:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cambVersion=`awk '{if ($1 == "camb:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| forutilsVersion=`awk '{if ($1 == "forutils:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| fspsVersion=`awk '{if ($1 == "fsps:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cloudyVersion=`awk '{if ($1 == "cloudy:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| # Check that executables were statically linked | |
| ! ldd dynamic/CAMB-${cambVersion}/fortran/camb | |
| ! ldd dynamic/AxionCAMB/camb | |
| ! ldd dynamic/class_public-${classVersion}/class | |
| ! ldd dynamic/RecFast/recfast.exe | |
| ! ldd dynamic/fsps-${fspsVersion}/src/autosps.exe | |
| tar cfj tools.tar.bz2 \ | |
| dynamic/CAMB-${cambVersion}/fortran/camb \ | |
| dynamic/AxionCAMB/camb \ | |
| dynamic/class_public-${classVersion}/class \ | |
| dynamic/RecFast/recfast.exe \ | |
| dynamic/RecFast/currentVersion \ | |
| dynamic/c${cloudyVersion}/source/cloudy.exe \ | |
| dynamic/c${cloudyVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/src/autosps.exe \ | |
| dynamic/fsps-${fspsVersion}/dust \ | |
| dynamic/fsps-${fspsVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/nebular \ | |
| dynamic/fsps-${fspsVersion}/SPECTRA \ | |
| dynamic/fsps-${fspsVersion}/OUTPUTS \ | |
| dynamic/fsps-${fspsVersion}/ISOCHRONES | |
| - name: Upload tools | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-tools | |
| path: ./datasets/tools.tar.bz2 | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ## MacOS | |
| ### Static executable | |
| Build-Executable-MacOS: | |
| runs-on: macos-12 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: Build Galacticus | |
| run: | | |
| set -o pipefail | |
| make -j3 Galacticus.exe tests.hashes.cryptographic.exe 2>&1 | tee build.log | |
| ./scripts/build/staticRelinker.pl `grep '\-o Galacticus.exe' build.log` | |
| ./scripts/build/staticRelinker.pl `grep '\-o tests.hashes.cryptographic.exe' build.log` | |
| dsymutil -o Galacticus.exe.dSYM Galacticus.exe | |
| zip -r debugSymbolsMacOS.zip Galacticus.exe.dSYM | |
| mv Galacticus.exe Galacticus_MacOS.exe | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec-MacOS | |
| path: 'Galacticus_MacOS.exe' | |
| - name: Upload test code executables | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-execs-MacOS | |
| path: 'tests.*.exe' | |
| - name: Upload Galacticus debug symbols | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-debug-MacOS | |
| path: 'debugSymbolsMacOS.zip' | |
| ### Apple Silicon build | |
| Build-Executable-MacOS-M1: | |
| runs-on: macos-14 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: Build Galacticus | |
| run: | | |
| set -o pipefail | |
| make -j3 Galacticus.exe 2>&1 | tee build.log | |
| ./scripts/build/staticRelinker.pl `grep '\-o Galacticus.exe' build.log` | |
| dsymutil -o Galacticus.exe.dSYM Galacticus.exe | |
| zip -r debugSymbolsMacOS-M1.zip Galacticus.exe.dSYM | |
| mv Galacticus.exe Galacticus_MacOS-M1.exe | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-exec-MacOS-M1 | |
| path: 'Galacticus_MacOS-M1.exe' | |
| - name: Upload Galacticus debug symbols | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-debug-MacOS-M1 | |
| path: 'debugSymbolsMacOS-M1.zip' | |
| ## Library | |
| Build-Library-MacOS: | |
| runs-on: macos-12 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: Build Galacticus | |
| run: | | |
| make -j3 GALACTICUS_BUILD_OPTION=lib libgalacticus.so | |
| - name: Package the code | |
| run: | | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| mkdir galacticus | |
| mkdir galacticus/lib | |
| mkdir galacticus/python | |
| # Find all dynamic libraries needed (filtering out any non-"local" ones) and copy to our folder. | |
| otool -L libgalacticus.so | awk '{if (NR > 1) print $1}' | grep -e /usr/local -e /opt/local | xargs -n 1 -I{} cp {} galacticus/lib/ | |
| mv galacticus.py galacticus/python/ | |
| mv libgalacticus.so galacticus/lib/ | |
| zip -r libgalacticusMacOS.zip galacticus | |
| - name: Upload library | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-library-MacOS | |
| path: 'libgalacticusMacOS.zip' | |
| ### Tools | |
| Build-Tools-MacOS: | |
| runs-on: macos-12 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Check out repository datasets | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: galacticusorg/datasets | |
| path: datasets | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: Build Galacticus | |
| run: | | |
| make -j3 Galacticus.exe | |
| - name: Build tools | |
| run: | | |
| export GALACTICUS_EXEC_PATH=`pwd` | |
| export FCCOMPILER=gfortran-11 | |
| export CCOMPILER=gcc-11 | |
| export CPPCOMPILER=g++-11 | |
| export GALACTICUS_FCFLAGS="-fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib" | |
| export GALACTICUS_CFLAGS="-I/usr/local/include -I/opt/local/include" | |
| export GALACTICUS_CPPFLAGS="-I/usr/local/include -I/opt/local/include" | |
| classVersion=`awk '{if ($1 == "class:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cambVersion=`awk '{if ($1 == "camb:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| forutilsVersion=`awk '{if ($1 == "forutils:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| fspsVersion=`awk '{if ($1 == "fsps:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cloudyVersion=`awk '{if ($1 == "cloudy:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| mkdir -p $GALACTICUS_DATA_PATH/dynamic | |
| set -o pipefail | |
| ./Galacticus.exe parameters/buildTools.xml 2>&1 | tee build.log | |
| cd $GALACTICUS_DATA_PATH/dynamic/CAMB-${cambVersion}/fortran/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 -cpp -Ofast -fopenmp -fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib -JRelease -IRelease/ -I"/Users/runner/work/galacticus/galacticus/datasets/dynamic/CAMB-${cambVersion}/fortran/../forutils/Release/" Release/inidriver.o Release/libcamb.a -L"/Users/runner/work/galacticus/galacticus/datasets/dynamic/CAMB-${cambVersion}/fortran/../forutils/Release/" -lforutils -o camb | |
| cd $GALACTICUS_DATA_PATH/dynamic/AxionCAMB/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 -O3 -fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib constants.o utils.o subroutines.o inifile.o power_tilt.o recfast_axion.o reionization.o modules.o bessels.o equations_ppf.o halofit_ppf.o lensing.o SeparableBispectrum.o cmbmain.o camb.o axion_background.o inidriver_axion.F90 -o camb | |
| cd $GALACTICUS_DATA_PATH/dynamic/class_public-${classVersion}/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o class ' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH/dynamic/RecFast/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 recfast.for -o recfast.exe -O3 -ffixed-form -ffixed-line-length-none | |
| cd $GALACTICUS_DATA_PATH/dynamic/c${cloudyVersion}/source/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o cloudy.exe' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH/dynamic/fsps-${fspsVersion}/src | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o autosps.exe' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH | |
| zip -r toolsMacOS.zip \ | |
| dynamic/CAMB-${cambVersion}/fortran/camb \ | |
| dynamic/AxionCAMB/camb \ | |
| dynamic/class_public-${classVersion}/class \ | |
| dynamic/RecFast/recfast.exe \ | |
| dynamic/RecFast/currentVersion \ | |
| dynamic/c${cloudyVersion}/source/cloudy.exe \ | |
| dynamic/c${cloudyVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/src/autosps.exe \ | |
| dynamic/fsps-${fspsVersion}/dust \ | |
| dynamic/fsps-${fspsVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/nebular \ | |
| dynamic/fsps-${fspsVersion}/SPECTRA \ | |
| dynamic/fsps-${fspsVersion}/OUTPUTS \ | |
| dynamic/fsps-${fspsVersion}/ISOCHRONES | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-tools-MacOS | |
| path: './datasets/toolsMacOS.zip' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| Build-Tools-MacOS-M1: | |
| runs-on: macos-14 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Check out repository datasets | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: galacticusorg/datasets | |
| path: datasets | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: Build Galacticus | |
| run: | | |
| make -j3 Galacticus.exe 2>&1 | tee build.log | |
| ./scripts/build/staticRelinker.pl `grep '\-o Galacticus.exe' build.log` | |
| - name: Build tools | |
| run: | | |
| export GALACTICUS_EXEC_PATH=`pwd` | |
| export FCCOMPILER=gfortran-11 | |
| export CCOMPILER=gcc-11 | |
| export CPPCOMPILER=g++-11 | |
| export GALACTICUS_FCFLAGS="-fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib" | |
| export GALACTICUS_CFLAGS="-I/usr/local/include -I/opt/local/include" | |
| export GALACTICUS_CPPFLAGS="-I/usr/local/include -I/opt/local/include" | |
| classVersion=`awk '{if ($1 == "class:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cambVersion=`awk '{if ($1 == "camb:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| forutilsVersion=`awk '{if ($1 == "forutils:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| fspsVersion=`awk '{if ($1 == "fsps:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cloudyVersion=`awk '{if ($1 == "cloudy:") print $2}' ${GALACTICUS_EXEC_PATH}/aux/dependencies.yml` | |
| cd $GALACTICUS_EXEC_PATH | |
| git config --global --add safe.directory $GALACTICUS_EXEC_PATH | |
| mkdir -p $GALACTICUS_DATA_PATH/dynamic | |
| set -o pipefail | |
| ./Galacticus.exe parameters/buildTools.xml 2>&1 | tee build.log | |
| cd $GALACTICUS_DATA_PATH/dynamic/CAMB-${cambVersion}/fortran/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 -cpp -Ofast -fopenmp -fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib -JRelease -IRelease/ -I"/Users/runner/work/galacticus/galacticus/datasets/dynamic/CAMB-${cambVersion}/fortran/../forutils/Release/" Release/inidriver.o Release/libcamb.a -L"/Users/runner/work/galacticus/galacticus/datasets/dynamic/CAMB-${cambVersion}/fortran/../forutils/Release/" -lforutils -o camb | |
| cd $GALACTICUS_DATA_PATH/dynamic/AxionCAMB/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 -O3 -fintrinsic-modules-path /usr/local/include -L/usr/local/lib -L/opt/local/lib constants.o utils.o subroutines.o inifile.o power_tilt.o recfast_axion.o reionization.o modules.o bessels.o equations_ppf.o halofit_ppf.o lensing.o SeparableBispectrum.o cmbmain.o camb.o axion_background.o inidriver_axion.F90 -o camb | |
| cd $GALACTICUS_DATA_PATH/dynamic/class_public-${classVersion}/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o class ' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH/dynamic/RecFast/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl gfortran-11 recfast.for -o recfast.exe -O3 -ffixed-form -ffixed-line-length-none | |
| cd $GALACTICUS_DATA_PATH/dynamic/c${cloudyVersion}/source/ | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o cloudy.exe' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH/dynamic/fsps-${fspsVersion}/src | |
| $GALACTICUS_EXEC_PATH/scripts/build/staticRelinker.pl `grep -E '\-o autosps.exe' $GALACTICUS_EXEC_PATH/build.log` | |
| cd $GALACTICUS_DATA_PATH | |
| zip -r toolsMacOSM1.zip \ | |
| dynamic/CAMB-${cambVersion}/fortran/camb \ | |
| dynamic/AxionCAMB/camb \ | |
| dynamic/class_public-${classVersion}/class \ | |
| dynamic/RecFast/recfast.exe \ | |
| dynamic/RecFast/currentVersion \ | |
| dynamic/c${cloudyVersion}/source/cloudy.exe \ | |
| dynamic/c${cloudyVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/src/autosps.exe \ | |
| dynamic/fsps-${fspsVersion}/dust \ | |
| dynamic/fsps-${fspsVersion}/data \ | |
| dynamic/fsps-${fspsVersion}/nebular \ | |
| dynamic/fsps-${fspsVersion}/SPECTRA \ | |
| dynamic/fsps-${fspsVersion}/OUTPUTS \ | |
| dynamic/fsps-${fspsVersion}/ISOCHRONES | |
| - name: Upload Galacticus executable | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: galacticus-tools-MacOS-M1 | |
| path: './datasets/toolsMacOSM1.zip' | |
| - run: echo "This job's status is ${{ job.status }}." | |
| # Benchmarks | |
| Benchmark-Dark-Matter-Only-Subhalos: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: benchmark-darkMatterOnlySubhalos.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 0 | |
| install: time | |
| uploadFile: testSuite/outputs/benchmark_darkMatterOnlySubhalos.json | |
| uploadName: benchmark-darkMatterOnlySubhalos | |
| secrets: inherit | |
| Benchmark-Milky-Way-Model: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: benchmark-milkyWay.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 1 | |
| install: time | |
| uploadFile: testSuite/outputs/benchmark_milkyWayModel.json | |
| uploadName: benchmark-milkyWayModel | |
| secrets: inherit | |
| # Profiling | |
| Profile-Dark-Matter-Only-Subhalos: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: perf | |
| cacheData: 0 | |
| name: darkMatterOnlySubHalos | |
| frequency: 500 | |
| secrets: inherit | |
| Profile-Milky-Way-Model: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: perf | |
| cacheData: 1 | |
| name: milkyWay | |
| frequency: 100 | |
| secrets: inherit | |
| Profile-Milky-Way-SIDM-Model: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: perf | |
| cacheData: 1 | |
| name: milkyWay_SIDM | |
| frequency: 100 | |
| secrets: inherit | |
| Profile-Dark-Matter-Only-Subhalos-GProf: | |
| needs: Build-Executables-Instrumented-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: gprof | |
| cacheData: 0 | |
| name: darkMatterOnlySubHalos | |
| secrets: inherit | |
| Profile-Milky-Way-GProf: | |
| needs: Build-Executables-Instrumented-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: gprof | |
| cacheData: 1 | |
| name: milkyWay | |
| Profile-Milky-Way-SIDM-GProf: | |
| needs: Build-Executables-Instrumented-Linux | |
| uses: ./.github/workflows/profile.yml | |
| with: | |
| profiler: gprof | |
| cacheData: 1 | |
| name: milkyWay_SIDM | |
| # Validation | |
| Validate-Dark-Matter-Only-Subhalos: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: validate-darkMatterOnlySubhalos.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 0 | |
| uploadFile: ./testSuite/outputs/*.json | |
| uploadName: validate-darkMatterOnlySubhalos | |
| secrets: inherit | |
| Validate-Milky-Way-Model: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: validate-milkyWay.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 1 | |
| uploadFile: ./testSuite/outputs/*.json | |
| uploadName: validate-milkyWayModel | |
| secrets: inherit | |
| Validate-PonosV: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: validate-PonosV.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 0 | |
| uploadFile: ./testSuite/outputs/*.json | |
| uploadName: validate-PonosV | |
| secrets: inherit | |
| Validate-Baryonic-Suppression: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: validate-baryonicSuppression.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 0 | |
| uploadFile: ./testSuite/outputs/*.json | |
| uploadName: validate-baryonicSuppression | |
| secrets: inherit | |
| Validate-Idealized-Subhalo-Simulations: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: validate-idealizedSubhaloSimulations-wrapper.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| cacheData: 0 | |
| uploadFile: ./testSuite/outputs/*.json | |
| uploadName: validate-idealizedSubhaloSimulations | |
| secrets: inherit | |
| # Tests | |
| ## Linux | |
| ### Test Codes | |
| Codes: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| executable: [ tests.nodes.exe, | |
| tests.parameters.exe, | |
| tests.files.exe, | |
| tests.IO.XML.exe, | |
| tests.ODE_solver.exe, | |
| tests.random.exe, | |
| tests.random.quasi.exe, | |
| tests.arrays.exe, | |
| tests.meshes.exe, | |
| tests.convex_hulls.exe, | |
| tests.comparisons.exe, | |
| tests.geometry.coordinate_systems.exe, | |
| tests.hashes.exe, | |
| tests.hashes.perfect.exe, | |
| tests.regular_expressions.exe, | |
| tests.hashes.cryptographic.exe, | |
| tests.integration.exe, | |
| tests.integration2.exe, | |
| tests.differentiation.exe, | |
| tests.tables.exe, | |
| tests.interpolation.exe, | |
| tests.interpolation.2D.exe, | |
| tests.make_ranges.exe, | |
| tests.mass_distributions.exe, | |
| tests.math_special_functions.exe, | |
| tests.math_distributions.exe, | |
| tests.math.fast.exe, | |
| tests.math.arithmetic.exe, | |
| tests.math.linear_algebra.exe, | |
| tests.root_finding.exe, | |
| tests.multi_dimensional_minimizer.exe, | |
| tests.search.exe, | |
| tests.Roman_numerals.exe, | |
| tests.SI_prefixes.exe, | |
| tests.sort.exe, | |
| tests.sort.topological.exe, | |
| tests.string_utilities.exe, | |
| tests.vectors.exe, | |
| tests.multi_counters.exe, | |
| tests.tensors.exe, | |
| tests.cosmic_age.exe, | |
| tests.spherical_collapse.open.exe, | |
| tests.spherical_collapse.flat.exe, | |
| tests.spherical_collapse.dark_energy.EdS.exe, | |
| tests.spherical_collapse.dark_energy.open.exe, | |
| tests.spherical_collapse.dark_energy.lambda.exe, | |
| tests.spherical_collapse.dark_energy.constantEoSminusHalf.exe, | |
| tests.spherical_collapse.dark_energy.constantEoSminusTwoThirds.exe, | |
| tests.spherical_collapse.dark_energy.constantEoSminus0.6.exe, | |
| tests.spherical_collapse.dark_energy.constantEoSminus0.8.exe, | |
| tests.spherical_collapse.baryons_dark_matter.exe, | |
| tests.spherical_collapse.nonlinear.exe, | |
| tests.warm_dark_matter.exe, | |
| tests.linear_growth.cosmological_constant.exe, | |
| tests.linear_growth.EdS.exe, | |
| tests.linear_growth.open.exe, | |
| tests.linear_growth.dark_energy.exe, | |
| tests.linear_growth.baryons.EdS.exe, | |
| tests.halo_mass_function.Tinker.exe, | |
| tests.halo_mass_function.Reed2007.exe, | |
| tests.halo_mass_function.environment_averaged.exe, | |
| tests.comoving_distance.exe, | |
| tests.mass_accretion_history.Correa2015.exe, | |
| tests.Zhao2009_algorithms.dark_energy.exe, | |
| tests.Zhao2009_algorithms.EdS.exe, | |
| tests.Zhao2009_algorithms.open.exe, | |
| tests.NFW96_concentration.dark_energy.exe, | |
| tests.Prada2011_concentration.exe, | |
| tests.DiemerKravtsov2014_concentration.exe, | |
| tests.concentration.Correa2015.exe, | |
| tests.concentrations.exe, | |
| tests.biases.exe, | |
| tests.kepler_orbits.exe, | |
| tests.abundances.exe, | |
| tests.sigma.exe, | |
| tests.power_spectrum.primordial.exe, | |
| tests.power_spectrum.exe, | |
| tests.transfer_functions.exe, | |
| tests.black_hole_fundamentals.exe, | |
| tests.bug745815.exe, | |
| tests.gaunt_factors.exe, | |
| tests.cooling_functions.exe, | |
| tests.accretion_disks.exe, | |
| tests.mass_accretion_history.Hearin2021.exe, | |
| tests.mass_accretion_history.Hearin2021_stochastic.exe, | |
| tests.dark_matter_profiles.exe, | |
| tests.dark_matter_profiles.projected.exe, | |
| tests.dark_matter_profiles.adiabaticGnedin2004.exe, | |
| tests.dark_matter_profiles.heated.exe, | |
| tests.dark_matter_halo_radius_enclosing_mass.exe, | |
| tests.dark_matter_profiles.tidal_tracks.exe, | |
| tests.dark_matter_profiles.generic.exe, | |
| tests.dark_matter_profiles.finite_resolution.exe, | |
| tests.dark_matter_profiles.Zhao1996.exe, | |
| tests.spectra.postprocess.Inoue2014.exe, | |
| tests.recombination_computed.exe, | |
| tests.recombination_cooling.Hummer.exe, | |
| tests.locks.exe, | |
| tests.initial_mass_functions.exe, | |
| tests.stellar_populations.exe, | |
| tests.stellar_populations.luminosities.exe, | |
| tests.excursion_sets.exe, | |
| tests.merger_tree_branching.exe, | |
| tests.event_hooks.exe, | |
| tests.tree_branch_destroy.exe, | |
| tests.binary_search_trees.exe, | |
| tests.orbits.exe, | |
| tests.debugging.exe, | |
| tests.hashes.cryptographic.exe ] | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: ${{ matrix.executable }} | |
| artifact: test-execs | |
| secrets: inherit | |
| ### Test HDF5 IO | |
| IO-HDF5: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: tests.IO.HDF5.exe | |
| artifact: test-execs | |
| requirePython: 1 | |
| secrets: inherit | |
| ### Test Crash | |
| Crash: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: tests.crash.exe | |
| artifact: test-execs | |
| expectCrash: 1 | |
| secrets: inherit | |
| ### Test Fail | |
| Fail: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: tests.fail.exe | |
| artifact: test-execs | |
| expectFail: 1 | |
| secrets: inherit | |
| ### MPI Test Codes | |
| Codes-MPI: | |
| needs: Build-Executables-MPI-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| executable: [ tests.MPI.exe, | |
| tests.radiative_transfer.atomic_matter.state_solver.exe ] | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: ${{ matrix.executable }} | |
| artifact: test-execs-MPI | |
| mpi: 1 | |
| secrets: inherit | |
| ### Debugging Test Codes | |
| Codes-Debugging: | |
| needs: Build-Executables-Debugging-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| executable: [ tests.debugging.exe ] | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| executable: ${{ matrix.executable }} | |
| artifact: test-execs-debugging | |
| secrets: inherit | |
| ### Cosmology | |
| Cosmology: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:2", "2:2" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-cosmology.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| ### Mass Conservation | |
| Mass-Conservation: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ "test-mass-conservation-simple.pl", "test-mass-conservation-standard.pl", "test-mass-conservation-coldMode.pl" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4" | |
| secrets: inherit | |
| ### Merger Trees | |
| Merger-Tree-Builder: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:4", "2:4", "3:4", "4:4" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-merger-tree-builder.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| Merger-Tree-Write: | |
| needs: Build-Executable-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-merger-tree-write.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4" | |
| needsIRATE: 1 | |
| secrets: inherit | |
| ## Model Integration | |
| Model-Integration: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:2", "2:2" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-model-integration.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| ## Misc Models | |
| Miscellaneous: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ test-allowed-parameters.pl, | |
| test-bar-instability.pl, | |
| test-transfer-functions-axion.pl, | |
| test-mass-definitions.pl, | |
| test-branchlessTrees.pl, | |
| test-branchSubsampling.pl, | |
| test-CGM-mass-cooled.pl, | |
| test-concentration-Ludlow2016.pl, | |
| test-tidallyTruncatedNFWFit.pl, | |
| test-constraint-deterministic-spins.pl, | |
| test-constraint-mass-function.pl, | |
| test-extract-directives.pl, | |
| test-fortran-utils.pl, | |
| test-halo-mass-functions.pl, | |
| test-inactive_luminosities.pl, | |
| test-interoutput-star-formation-rate.pl, | |
| test-mass-host-maximum.pl, | |
| test-noninstantaneous-recycling.pl, | |
| test-satellite-distance-minimum.pl, | |
| test-treeFilterLabels.pl, | |
| test-output.pl, | |
| test-output-tree-contiguousity.pl, | |
| test-outputSelector.pl, | |
| test-parameter-validation.pl, | |
| test-perl-modules.pl, | |
| test-reproducibility.pl, | |
| test-splitForests.pl, | |
| test-star-formation-histories-adaptive.py, | |
| test-mostMassiveProgenitorIsSubhalo.py, | |
| test-stateRestore.pl, | |
| test-checkpointing.pl, | |
| test-stellar-mass-weighted-ages.pl, | |
| test-tidalTracks.pl, | |
| test-transferFunctionHalfModeSlope.pl, | |
| test-galacticStructureStateDeallocateBug.pl, | |
| test-inactiveNumerics.pl, | |
| test-impulsiveHeating.pl, | |
| test-haloTriaxiality.pl, | |
| test-parallelTreeBuild.pl, | |
| test-duplicatedOutputPropertyName.pl ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| secrets: inherit | |
| Miscellaneous-IRATE: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ test-Bolshoi-tree-builder.pl, | |
| test-Millennium-tree-builder.pl ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| needsIRATE: 1 | |
| secrets: inherit | |
| Miscellaneous-Deep: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ test-parameter-migration.pl ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| fetchDepth: 0 | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| secrets: inherit | |
| Miscellaneous-Cached: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ test-constrained-merger-trees.pl ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| cacheData: 1 | |
| runPath: ./testSuite | |
| secrets: inherit | |
| Miscellaneous-Models: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ testSuite/parameters/mergerTreeEvolverThreaded.xml ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| secrets: inherit | |
| ### Outputs | |
| Outputs: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:10", "2:10", "3:10", "4:10", "5:10", "6:10", "7:10", "8:10", "9:10", "10:10" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-outputs.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| ### Regressions | |
| Regressions: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ testSuite/regressions/bug1066052.pl, | |
| testSuite/regressions/adaptiveSFHLengths.py, | |
| testSuite/regressions/mergerTreeBoxSizeWeight.pl, | |
| testSuite/regressions/satellitePresetBoundMassNonZero.pl, | |
| testSuite/regressions/setProperties.pl, | |
| testSuite/regressions/cosmicEmu.pl, | |
| testSuite/regressions/bug1053153.xml, | |
| testSuite/regressions/bug711424.xml, | |
| testSuite/regressions/bug725315.xml, | |
| testSuite/regressions/coincidentMergerAndBranchJump.xml, | |
| testSuite/regressions/deadlockMergeTargetInDescendentOfMergee2.xml, | |
| testSuite/regressions/deadlockMergeTargetInDescendentOfMergee.xml, | |
| testSuite/regressions/finalTimeBeforeOutputTime.xml, | |
| testSuite/regressions/immediateSubSubMergerThenBranchJump.xml, | |
| testSuite/regressions/initialSatelliteNoPrimaryProgenitor.xml, | |
| testSuite/regressions/linearGrowthForFutureModel.xml, | |
| testSuite/regressions/ludlowScaleSetBeforeTreeInitialization.xml, | |
| testSuite/regressions/mergerAtFinalTimeInTree.xml, | |
| testSuite/regressions/particulate.xml, | |
| testSuite/regressions/subhaloMergesAtFinalTimeOfTree.xml, | |
| testSuite/regressions/subhaloTwoConsecutiveMergers.xml, | |
| testSuite/regressions/treeWithInitialSatelliteInProgenitorlessHost.xml, | |
| testSuite/regressions/treeWithNoPrimaryProgenitor.xml, | |
| testSuite/regressions/outputRank2ExtendSegFault.xml, | |
| testSuite/regressions/barInstabilityFPE.xml ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| secrets: inherit | |
| Regressions-Cached: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| file: [ testSuite/regressions/cole2000TreeBuilderWDMNodeWellOrdering.xml, | |
| testSuite/regressions/issue142.xml ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: ${{ matrix.file }} | |
| artifact: galacticus-exec | |
| cacheData: 1 | |
| secrets: inherit | |
| ### Methods | |
| Methods: | |
| needs: Build-Executable-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:20", "2:20", "3:20", "4:20", "5:20", "6:20", "7:20", "8:20", "9:20", "10:20", "11:20", "12:20", "13:20", "14:20", "15:20", "16:20", "17:20", "18:20", "19:20", "20:20" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-methods.pl | |
| artifact: galacticus-exec | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 4 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| ### MPI Misc Models | |
| MPI-State-Restore: | |
| needs: Build-Executables-MPI-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-stateRestore_MPI.pl | |
| artifact: galacticus-exec-MPI | |
| runPath: ./testSuite | |
| options: --processesPerNode 8 --allow-run-as-root yes | |
| secrets: inherit | |
| MPI-Radiative-Transfer-Stromgren-Sphere: | |
| needs: Build-Executables-MPI-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-radiativeTransfer-StromgrenSphere_MPI.pl | |
| artifact: galacticus-exec-MPI | |
| runPath: ./testSuite | |
| options: --processesPerNode 4 --allow-run-as-root yes | |
| secrets: inherit | |
| MPI-MCMC: | |
| needs: Build-Executables-MPI-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: parameters/tutorials/mcmcConfig.xml | |
| artifact: galacticus-exec-MPI | |
| mpi: 1 | |
| processesPerNode: 4 | |
| secrets: inherit | |
| ### MPI Methods | |
| Methods-MPI: | |
| needs: Build-Executables-MPI-Linux | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| instance: [ "1:2", "2:2" ] | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| file: test-methods_MPI.pl | |
| artifact: galacticus-exec-MPI | |
| runPath: ./testSuite | |
| options: "--launchMethod local --threadMaximum 1 --ompThreads 1 --instance ${{ matrix.instance }}" | |
| secrets: inherit | |
| ### Memory leaks (non-MPI) | |
| Memory-Leaks: | |
| needs: Build-Executable-Linux-Non-Static | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| install: valgrind | |
| file: test-memory-leaks.pl | |
| artifact: galacticus-exec-non-static | |
| runPath: ./testSuite | |
| options: --mpi 0 | |
| secrets: inherit | |
| ### Memory leaks (MPI) | |
| Memory-Leaks-MPI: | |
| needs: Build-Executables-MPI-Linux | |
| uses: ./.github/workflows/testModel.yml | |
| with: | |
| install: valgrind | |
| file: test-memory-leaks.pl | |
| artifact: galacticus-exec-MPI | |
| runPath: ./testSuite | |
| options: --mpi 1 | |
| secrets: inherit | |
| ## Python Interface | |
| Python-Interface: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/galacticusorg/buildenv:latest | |
| needs: Build-Library-Linux | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - run: echo "The ${{ github.repository }} repository has been cloned to the runner." | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "PYTHONPATH=$GITHUB_WORKSPACE/galacticus/python" >> $GITHUB_ENV | |
| - name: Install Python2 | |
| run: | | |
| apt -y update && apt -y upgrade | |
| apt -y install python2.7 | |
| - name: Download library | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-library | |
| - name: Test interface | |
| run: | | |
| tar xvfj libgalacticus.tar.bz2 | |
| python2.7 testSuite/test-Python-interface.py | |
| - run: echo "This job's status is ${{ job.status }}." | |
| ## MacOS | |
| ### Test Codes | |
| Codes-MacOS: | |
| needs: Build-Executable-MacOS | |
| strategy: | |
| # Ensure all jobs are run, even if some fail. | |
| fail-fast: false | |
| matrix: | |
| executable: [ tests.hashes.cryptographic.exe ] | |
| uses: ./.github/workflows/testCode.yml | |
| with: | |
| runner: macos-12 | |
| executable: ${{ matrix.executable }} | |
| artifact: test-execs-MacOS | |
| secrets: inherit | |
| ### Test Python Interface | |
| Python-Interface-MacOS: | |
| runs-on: macos-12 | |
| steps: | |
| - run: echo "The job was automatically triggered by a ${{ github.event_name }} event." | |
| - run: echo "This job is now running on a ${{ runner.os }} server." | |
| - run: echo "The name of the branch is ${{ github.ref }} and the repository is ${{ github.repository }}." | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Set up build environment | |
| uses: ./.github/actions/buildMacOS | |
| - name: "Set environmental variables" | |
| run: | | |
| echo "GALACTICUS_EXEC_PATH=$GITHUB_WORKSPACE" >> $GITHUB_ENV | |
| echo "PYTHONPATH=$GITHUB_WORKSPACE/galacticus/python" >> $GITHUB_ENV | |
| - name: Install Python | |
| run: | | |
| sudo port install python27 | |
| sudo port select --set python python27 | |
| sudo port select --set python2 python27 | |
| - name: Build Galacticus | |
| run: | | |
| export GALACTICUS_EXEC_PATH=`pwd` | |
| export FCCOMPILER=gfortran-11 | |
| export CCOMPILER=gcc-11 | |
| export CPPCOMPILER=g++-11 | |
| export GALACTICUS_FCFLAGS="-fintrinsic-modules-path /usr/local/finclude -fintrinsic-modules-path /usr/local/include -fintrinsic-modules-path /usr/local/include/gfortran -fintrinsic-modules-path /usr/local/lib/gfortran/modules -L/usr/local/lib -L/opt/local/lib" | |
| export GALACTICUS_CFLAGS="-I/usr/local/include -I/opt/local/include" | |
| export GALACTICUS_CPPFLAGS="-I/usr/local/include -I/opt/local/include -I/usr/local/include/libqhullcpp" | |
| make -j3 GALACTICUS_BUILD_OPTION=lib libgalacticus.so | |
| mkdir galacticus | |
| mkdir galacticus/lib | |
| mkdir galacticus/python | |
| mv galacticus.py galacticus/python/ | |
| mv libgalacticus.so galacticus/lib/ | |
| - name: Test interface | |
| run: | | |
| python2 testSuite/test-Python-interface.py | |
| - run: echo "This job's status is ${{ job.status }}." | |
| # Validate, deploy and update | |
| Validate: | |
| runs-on: ubuntu-latest | |
| needs: [ Benchmark-Dark-Matter-Only-Subhalos, Benchmark-Milky-Way-Model, Validate-Dark-Matter-Only-Subhalos, Validate-Milky-Way-Model, Validate-PonosV, Validate-Baryonic-Suppression, Validate-Idealized-Subhalo-Simulations ] | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: 'Dark matter-only subhalos benchmarks' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Dark matter-only subhalos benchmarks' | |
| type: 'benchmark' | |
| suffix: 'darkMatterOnlySubhalos' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Milky Way model benchmarks' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Milky Way model benchmarks' | |
| type: 'benchmark' | |
| suffix: 'milkyWayModel' | |
| threshold: '140%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Dark matter-only subhalos validation' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Dark matter-only subhalos benchmarks' | |
| type: 'validate' | |
| suffix: 'darkMatterOnlySubhalos' | |
| threshold: '115%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Milky Way model validation' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Milky Way model benchmarks' | |
| type: 'validate' | |
| suffix: 'milkyWayModel' | |
| threshold: '185%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.005; γ=1.5)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.005; γ=1.5)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.005_gamma1.5' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.01; γ=1.5)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.01; γ=1.5)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.01_gamma1.5' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.05; γ=0.5)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.05; γ=0.5)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.05_gamma0.5' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.05; γ=1.0)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.05; γ=1.0)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.05_gamma1.0' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=0.0)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=0.0)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.2_gamma0.0' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=0.5)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=0.5)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.2_gamma0.5' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=1.0)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.2; γ=1.0)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.2_gamma1.0' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: 'Idealized subhalo simulations (rₚ/rₐ=0.4; γ=0.0)' | |
| uses: ./.github/actions/benchmark | |
| with: | |
| name: 'Idealized subhalo simulations (rₚ/rₐ=0.4; γ=0.0)' | |
| type: 'validate' | |
| artifact: 'validate-idealizedSubhaloSimulations' | |
| suffix: 'idealizedSubhaloSimulation_rpra0.4_gamma0.0' | |
| threshold: '110%' | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Download artifacts (validate-PonosV) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: validate-PonosV | |
| - name: Download artifacts (validate-baryonicSuppression) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: validate-baryonicSuppression | |
| - name: Download artifacts (build-profile) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: build-profile | |
| - name: Push validation results | |
| run: | | |
| git checkout gh-pages | |
| mkdir -p dev/valid/darkMatterOnlySubhalos | |
| mkdir -p dev/valid/milkyWayModel | |
| mkdir -p dev/valid/strongLensing | |
| mkdir -p dev/valid/idealizedSubhaloSimulations | |
| mv results_darkMatterOnlySubhalos.json dev/valid/darkMatterOnlySubhalos/results.json | |
| mv results_milkyWayModel.json dev/valid/milkyWayModel/results.json | |
| mv results_PonosV.json dev/valid/strongLensing/results_PonosV.json | |
| mv results_baryonicSuppression.json dev/valid/baryonicSuppression/results_baryonicSuppression.json | |
| mv results_idealizedSubhaloSimulation_*.json dev/valid/idealizedSubhaloSimulations/ | |
| git config --local user.email "github@users.noreply.github.com" | |
| git config --local user.name "github-action-validate" | |
| git add dev/valid/darkMatterOnlySubhalos/results.json dev/valid/milkyWayModel/results.json dev/valid/strongLensing/results_PonosV.json dev/valid/baryonicSuppression/results_baryonicSuppression.json dev/valid/idealizedSubhaloSimulations/results_idealizedSubhaloSimulation_*.json | |
| git commit -m "Update validation results" | |
| git push --set-upstream origin gh-pages | |
| git checkout - | |
| if: github.event_name != 'pull_request' | |
| - name: Push build profile | |
| run: | | |
| git checkout gh-pages | |
| mkdir -p dev/bench/meta | |
| mv buildProfile.html dev/bench/meta/buildProfile.html | |
| git config --local user.email "github@users.noreply.github.com" | |
| git config --local user.name "github-action-validate" | |
| git add dev/bench/meta/buildProfile.html | |
| git commit -m "Update build profile" | |
| git push --set-upstream origin gh-pages | |
| git checkout - | |
| if: github.event_name != 'pull_request' | |
| Deploy: | |
| runs-on: ubuntu-latest | |
| if: github.ref == 'refs/heads/master' | |
| needs: [ Build-Executable-Linux, | |
| Build-Executables-Instrumented-Linux, | |
| Build-Executables-MPI-Linux, | |
| Build-Library-Linux, | |
| Build-Docker-Linux, | |
| Build-Documentation-Linux, | |
| Build-Tools, | |
| Build-Executable-MacOS, | |
| Build-Executable-MacOS-M1, | |
| Build-Library-MacOS, | |
| Build-Tools-MacOS, | |
| Build-Tools-MacOS-M1, | |
| Profile-Dark-Matter-Only-Subhalos, | |
| Profile-Milky-Way-Model, | |
| Profile-Milky-Way-SIDM-Model, | |
| Profile-Dark-Matter-Only-Subhalos-GProf, | |
| Profile-Milky-Way-GProf, | |
| Profile-Milky-Way-SIDM-GProf, | |
| Codes, | |
| Crash, | |
| Fail, | |
| Codes-MPI, | |
| Codes-Debugging, | |
| Memory-Leaks, | |
| Memory-Leaks-MPI, | |
| Cosmology, | |
| Mass-Conservation, | |
| Merger-Tree-Builder, | |
| Merger-Tree-Write, | |
| Model-Integration, | |
| Miscellaneous, | |
| Miscellaneous-Cached, | |
| Miscellaneous-IRATE, | |
| Miscellaneous-Deep, | |
| Miscellaneous-Models, | |
| Outputs, | |
| Regressions, | |
| Regressions-Cached, | |
| Methods, | |
| Methods-MPI, | |
| MPI-State-Restore, | |
| MPI-Radiative-Transfer-Stromgren-Sphere, | |
| MPI-MCMC, | |
| Python-Interface, | |
| Codes-MacOS, | |
| Python-Interface-MacOS, | |
| Validate ] | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Download artifacts (executable-linux) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-exec | |
| - name: Download artifacts (library-linux) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-library | |
| - name: Download artifacts (docs) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-docs | |
| - name: Download artifacts (tools-linux) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-tools | |
| - name: Upload assets to release | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| gh release upload bleeding-edge ./Galacticus.exe ./libgalacticus.tar.bz2 ./Galacticus_Usage.pdf ./Galacticus_Physics.pdf ./Galacticus_Development.pdf ./Galacticus_Source.pdf ./tools.tar.bz2 --clobber | |
| rm ./Galacticus.exe ./libgalacticus.tar.bz2 ./Galacticus_Usage.pdf ./Galacticus_Physics.pdf ./Galacticus_Development.pdf ./Galacticus_Source.pdf ./tools.tar.bz2 | |
| - name: Download artifacts (executable-macos) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-exec-MacOS | |
| - name: Download artifacts (debug-macos) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-debug-MacOS | |
| - name: Download artifacts (executable-macos-m1) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-exec-MacOS-M1 | |
| - name: Download artifacts (debug-macos-m1) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-debug-MacOS-M1 | |
| - name: Download artifacts (library-macos) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-library-MacOS | |
| - name: Download artifacts (tools-macos) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-tools-MacOS | |
| - name: Download artifacts (tools-macos-m1) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: galacticus-tools-MacOS-M1 | |
| - name: Upload assets to release | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| gh release upload bleeding-edge ./Galacticus_MacOS.exe ./Galacticus_MacOS-M1.exe ./libgalacticusMacOS.zip ./toolsMacOS.zip ./toolsMacOSM1.zip ./debugSymbolsMacOS.zip ./debugSymbolsMacOS-M1.zip --clobber | |
| rm ./Galacticus_MacOS.exe ./libgalacticusMacOS.zip ./toolsMacOS.zip ./toolsMacOSM1.zip ./debugSymbolsMacOS.zip | |
| - name: Download artifacts (perf-darkMatterOnlySubHalos) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-darkMatterOnlySubHalos | |
| - name: Download artifacts (perf-milkyWay) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-milkyWay | |
| - name: Download artifacts (perf-milkyWay_SIDM) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-milkyWay_SIDM | |
| - name: Download artifacts (perf-darkMatterOnlySubHalos-gprof) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-darkMatterOnlySubHalos-gprof | |
| - name: Download artifacts (perf-milkyWay-gprof) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-milkyWay-gprof | |
| - name: Download artifacts (perf-milkyWay_SIDM-gprof) | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: perf-milkyWay_SIDM-gprof | |
| - name: Upload assets to release | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| gh release upload bleeding-edge ./darkMatterOnlySubHalos.perf.bz2 ./milkyWay.perf.bz2 ./milkyWay_SIDM.perf.bz2 ./darkMatterOnlySubHalos.gprof.bz2 ./milkyWay.gprof.bz2 ./milkyWay_SIDM.gprof.bz2 --clobber | |
| rm ./darkMatterOnlySubHalos.perf.bz2 ./milkyWay.perf.bz2 ./milkyWay_SIDM.perf.bz2 ./darkMatterOnlySubHalos.gprof.bz2 ./milkyWay.gprof.bz2 ./milkyWay_SIDM.gprof.bz2 | |
| Update-Release-Tag: | |
| runs-on: ubuntu-latest | |
| if: github.ref == 'refs/heads/master' | |
| needs: Deploy | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Update tag | |
| run: | | |
| git tag -f bleeding-edge | |
| git push origin -f bleeding-edge | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - run: echo "This job's status is ${{ job.status }}." |