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Integration tests for handler assignment methods
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<?xml version="1.0"?> | ||
<job_conf> | ||
<plugins> | ||
<plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> | ||
</plugins> | ||
<handlers{assign_with}{default}> | ||
{handlers} | ||
</handlers> | ||
<destinations> | ||
<destination id="local" runner="local"/> | ||
</destinations> | ||
</job_conf> |
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"""Integration tests for configurable job handler assignment methods.""" | ||
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import os | ||
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from base import integration_util | ||
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SCRIPT_DIRECTORY = os.path.abspath(os.path.dirname(__file__)) | ||
HANDLER_TEMPLATE_JOB_CONFIG_FILE = os.path.join(SCRIPT_DIRECTORY, "handler_template_job_conf.xml") | ||
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class WritesConfig(object): | ||
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def _with_handlers_config(self, assign_with=None, default=None, handlers=None): | ||
handlers = handlers or [] | ||
template = { | ||
'assign_with': ' assign_with="%s"' % assign_with if assign_with is not None else '', | ||
'default': ' default="%s"' % default if default is not None else '', | ||
'handlers': '\n'.join([ | ||
'<handler id="{id}"{tags}/>'.format( | ||
id=x['id'], | ||
tags=' tags="%s"' % x['tags'] if 'tags' in x else '' | ||
) for x in handlers]), | ||
} | ||
self.__write_config_from(HANDLER_TEMPLATE_JOB_CONFIG_FILE, template=template) | ||
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def __write_config_from(self, path, template=None): | ||
template = template or {} | ||
self.__write_config(open(path, "r").read().format(**template)) | ||
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def __write_config(self, contents): | ||
with open(self._app.config.job_config_file, "w") as f: | ||
f.write(contents) | ||
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class BaseHandlerAssignmentMethodIntegrationTestCase(integration_util.IntegrationTestCase, WritesConfig): | ||
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framework_tool_and_types = True | ||
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@classmethod | ||
def handle_galaxy_config_kwds(cls, config): | ||
cls.jobs_directory = cls._test_driver.mkdtemp() | ||
config["jobs_directory"] = cls.jobs_directory | ||
config["job_config_file"] = os.path.join(cls.jobs_directory, "job_conf.xml") | ||
# Disable tool dependency resolution. | ||
config["tool_dependency_dir"] = "none" | ||
config["enable_beta_mulled_containers"] = "true" | ||
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class DBPreassignHandlerAssignmentMethodIntegrationTestCase(BaseHandlerAssignmentMethodIntegrationTestCase): | ||
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def setUp(self): | ||
self._with_handlers_config(assign_with='db-preassign', handlers=[{'id': 'main'}]) | ||
super(DBPreassignHandlerAssignmentMethodIntegrationTestCase, self).setUp() | ||
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def test_handler_assignment(self): | ||
tool_id = 'config_vars' | ||
self._run_tool_test(tool_id) | ||
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class DBTransactionIsolationHandlerAssignmentMethodIntegrationTestCase(BaseHandlerAssignmentMethodIntegrationTestCase): | ||
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def setUp(self): | ||
self._with_handlers_config(assign_with='db-transaction-isolation', handlers=[{'id': 'main'}]) | ||
super(DBTransactionIsolationHandlerAssignmentMethodIntegrationTestCase, self).setUp() | ||
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def test_handler_assignment(self): | ||
self._skip_unless_postgres() | ||
tool_id = 'config_vars' | ||
self._run_tool_test(tool_id) | ||
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class DBSkipLockedHandlerAssignmentMethodIntegrationTestCase(BaseHandlerAssignmentMethodIntegrationTestCase): | ||
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def setUp(self): | ||
self._with_handlers_config(assign_with='db-skip-locked', handlers=[{'id': 'main'}]) | ||
super(DBSkipLockedHandlerAssignmentMethodIntegrationTestCase, self).setUp() | ||
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def test_handler_assignment(self): | ||
self._skip_unless_postgres() | ||
tool_id = 'config_vars' | ||
self._run_tool_test(tool_id) |
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