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Python3: port 215 files #2574

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merged 42 commits into from Jul 5, 2016

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commented Jun 29, 2016

This is a collective work done mainly during the GCC2016 Hackathon by @tshtatland, @xiaoqian1984, @alanryanwang, @ericenns and me. Thank you all for the tremendous effort!

xref: #1715

tshtatland and others added some commits Jun 25, 2016

Python3: more lib/galaxy/datatypes/converters/
lib/galaxy/datatypes/converters/fastq_to_fqtoc.py
lib/galaxy/datatypes/converters/gff_to_bed_converter.py
Python 3: more lib/galaxy/datatypes/converters/
lib/galaxy/datatypes/converters/lped_to_fped_converter.py
lib/galaxy/datatypes/converters/lped_to_pbed_converter.py
lib/galaxy/datatypes/converters/maf_to_fasta_converter.py
lib/galaxy/datatypes/converters/maf_to_interval_converter.py

nsoranzo and others added some commits Jun 26, 2016

Python3: the rest of lib/galaxy/datatypes/converters/
lib/galaxy/datatypes/converters/pbed_ldreduced_converter.py
lib/galaxy/datatypes/converters/pbed_to_lped_converter.py
lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py
lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py
lib/galaxy/datatypes/converters/wiggle_to_simple_converter.py
Python3: lib/galaxy/model/migrate/versions/0006..0013
lib/galaxy/model/migrate/versions/0006_change_qual_datatype.py
lib/galaxy/model/migrate/versions/0007_sharing_histories.py
lib/galaxy/model/migrate/versions/0008_galaxy_forms.py
lib/galaxy/model/migrate/versions/0009_request_table.py
lib/galaxy/model/migrate/versions/0010_hda_display_at_authz_table.py
lib/galaxy/model/migrate/versions/0011_v0010_mysql_index_fix.py
lib/galaxy/model/migrate/versions/0012_user_address.py
lib/galaxy/model/migrate/versions/0013_change_lib_item_templates_to_forms.py
Python3: lib/galaxy/model/migrate/versions/0014..0023
lib/galaxy/model/migrate/versions/0014_pages.py
lib/galaxy/model/migrate/versions/0015_tagging.py
lib/galaxy/model/migrate/versions/0016_v0015_mysql_index_fix.py
lib/galaxy/model/migrate/versions/0017_library_item_indexes.py
lib/galaxy/model/migrate/versions/0018_ordered_tags_and_page_tags.py
lib/galaxy/model/migrate/versions/0019_request_library_folder.py
lib/galaxy/model/migrate/versions/0020_library_upload_job.py
lib/galaxy/model/migrate/versions/0021_user_prefs.py
lib/galaxy/model/migrate/versions/0022_visualization_tables.py
lib/galaxy/model/migrate/versions/0023_page_published_and_deleted_columns.py

@nsoranzo nsoranzo added this to the 16.07 milestone Jun 29, 2016

@nsoranzo nsoranzo referenced this pull request Jun 29, 2016

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Python 3 support #14

1 of 8 tasks complete
@jmchilton

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commented Jun 29, 2016

👍 - thanks a ton all - awesome hackathon contributions.

@bgruening

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commented Jun 30, 2016

Half way through and this looks fantastic - thanks all!

@dannon

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commented Jul 5, 2016

+1

@dannon dannon merged commit a946b04 into galaxyproject:dev Jul 5, 2016

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@nsoranzo nsoranzo deleted the bxlab:python3 branch Jul 5, 2016

@bgruening

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commented Jul 6, 2016

👍 from me as well! Fantastic work!

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