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Remove seemingly unused file sort_gtf.py. #3362

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merged 1 commit into from Jan 1, 2017

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commented Dec 23, 2016

Added in df28aec - not used in that commit as far as I can tell.

Remove seemingly unused file sort_gtf.py.
Added in df28aec - not used in that commit.
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commented Dec 23, 2016

Ping @jgoecks

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commented Dec 27, 2016

I'm fine with removing this file, but it does provide a function that may be worthwhile to keep in mind going forward: it sorts a GTF not only by chromosome and coordinate position (which is simple with unix sort) but also by transcript/gene id. If it's ever important to sort—really sort—GTFs in Galaxy, this file will be important.

@bgruening bgruening merged commit 9654618 into galaxyproject:dev Jan 1, 2017

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