Add more repository installation test cases

[mvdbeek]

These were supposed to not pass without
#9159, but they do.
I don't think this increases test coverage but it might be handy
to have this as integration test cases when we rip out the toolshed
from the Galaxy code base ?

[mvdbeek]

oh no, first time i've seen the macro reload error back since I thought I fixed it last time :(

            tool = self.toolbox.get_tool("tool_with_macro")
            assert tool.version == "3.0"
    
>       self._try_until_no_errors(check_tool_macro)

test/unit/tools/test_toolbox.py:210: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
test/unit/tools/test_toolbox.py:255: in _try_until_no_errors
    raise e
test/unit/tools/test_toolbox.py:249: in _try_until_no_errors
    f()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

    def check_tool_macro():
        tool = self.toolbox.get_tool("tool_with_macro")
>       assert tool.version == "3.0"
E       AssertionError: assert '2.0' == '3.0'
E         - 2.0
E         + 3.0

test/unit/tools/test_toolbox.py:208: AssertionError

[jmchilton]

Rebase now that baseline tests pass?

[jmchilton]

Thank you kindly - looks awesome!