Add verbose logging to galaxy test output handling problems.

Author: jmchilton

planemo/cli.py

@@ -1,5 +1,6 @@
 import os
 import sys
+import traceback
 
 import click
 
@@ -44,10 +45,12 @@ def log(self, msg, *args):
             msg %= args
         click.echo(msg, file=sys.stderr)
 
-    def vlog(self, msg, *args):
+    def vlog(self, msg, *args, **kwds):
         """Logs a message to stderr only if verbose is enabled."""
         if self.verbose:
             self.log(msg, *args)
+            if kwds.get("exception", False):
+                traceback.print_exc(file=sys.stderr)
 
     @property
     def workspace(self):

planemo/galaxy_test/actions.py

@@ -92,7 +92,7 @@ def run_in_config(ctx, config, **kwds):
                     handle.write(build_report.build_report(test_data, report_type=kw_name))
 
     except Exception:
-        pass
+        ctx.vlog("Problem producing test output.", exception=True)
 
     __handle_summary(
         test_results,