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TNFR1-mediated ceramide production (R-HSA-5626978) #289

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ukemi opened this issue Oct 3, 2023 · 0 comments
Open
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TNFR1-mediated ceramide production (R-HSA-5626978) #289

ukemi opened this issue Oct 3, 2023 · 0 comments
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@ukemi
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ukemi commented Oct 3, 2023

  • Make mouse model: gomodel:6516135700000211
  • Age old GO question: Is hydrolysis of sphingomyeline into ceramide a [GO:0046513] ceramide biosynthetic process? That is what the Reactome pathway says. I made it a metabolic process with output ceramide.
  • Create a pathway for the acid sphingomyelinase? It shares adaptor molecules with the NF-kappaB one. PMID:8808629, PMID:9620659
  • Is there a missing step in the Reactome pathway? PMID: 20080539
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