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Fix allele-switch error message #134

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merged 1 commit into from
Feb 8, 2024
Merged

Fix allele-switch error message #134

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2 changes: 1 addition & 1 deletion src/test/java/genepi/imputationserver/steps/FastQualityControlTest.java
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Expand Up @@ -558,7 +558,7 @@ public void testQcStatisticsDontAllowAlleleSwitches() throws IOException {

assertTrue(context.hasInMemory("Excluded sites in total: 2,967"));
assertTrue(context.hasInMemory("Allele switch: 118,209"));
assertTrue(context.hasInMemory("<b>Error:</b> More than 33 allele switches have been detected. Instructions to solve this issue can be found in our documentation. Imputation cannot be started!"));
assertTrue(context.hasInMemory("<b>Error:</b> More than 33 allele switches have been detected. Imputation cannot be started!"));
}

public void testQcStatisticsFilterOverlap() throws IOException {
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