Min and Max Range formatted as characters instead of double

[timmocking]

A small suggestion: flowAI converts the Min and Max range as defined in the .FCS parameters to characters. This is normally not an issue, as saving the .FCS re-converts these to doubles. However, if you run an additional anomaly detection algorithm after running flowAI, the output is erroneous because of this.

library(flowAI)
library(flowCore)

ff <- read.FCS(FILE)
ff <- flow_auto_qc(ff, output=2)

meta <- flowWorkspace::pData(flowCore::parameters(ff))
typeof(meta['FSC-A', 'minRange'])

[giannimonaco]

Hi! Thank you for reporting this! You are right, the Min and Max range values were converted to characters for output=2. I just fixed it. Just use the github version if you need the fixed version soon.

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On Tue, 30 Nov 2021 at 12:57, Tim Mocking ***@***.***> wrote: A small suggestion: flowAI converts the Min and Max range as defined in the .FCS parameters to characters. This is normally not an issue, as saving the .FCS re-converts these to doubles. However, if you run an additional anomaly detection algorithm after running flowAI, the output is erroneous because of this. library(flowAI) library(flowCore) ff <- read.FCS(FILE) ff <- flow_auto_qc(ff, output=2) meta <- flowWorkspace::pData(flowCore::parameters(ff)) typeof(meta['FSC-A', 'minRange']) — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#5>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AC2UTEEWBB32COMEDT2RJ5LUOS33BANCNFSM5JBTPEKA> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>.