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Bump com.fasterxml.jackson.core:jackson-core from 2.16.1 to 2.16.2 #983

Bump com.fasterxml.jackson.core:jackson-core from 2.16.1 to 2.16.2

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Bump com.fasterxml.jackson.core:jackson-core from 2.16.1 to 2.16.2 #983

Bump com.fasterxml.jackson.core:jackson-core from 2.16.1 to 2.16.2
838cf9a
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Google Cloud Build / fhir-data-pipes-pr (cloud-build-fhir) succeeded Mar 12, 2024 in 36m 59s

Summary

Build Information

Trigger fhir-data-pipes-pr
Build 397cb9e4-65ac-40dd-85e1-09b5a0b2c034
Start 2024-03-12T07:56:43-07:00
Duration 36m16.674s
Status SUCCESS

Steps

Step Status Duration
Launch HAPI Source and Sink Servers SUCCESS 37.249s
Compile Bunsen and Pipeline SUCCESS 3m53.85s
Build Uploader Image SUCCESS 9.5s
Run Uploader Unit Tests SUCCESS 837ms
Build E2E Image SUCCESS 1m40.148s
Upload to HAPI SUCCESS 2m43s
Build Pipeline Images SUCCESS 17.993s
Run Batch Pipeline in FHIR-search mode with HAPI source SUCCESS 49.88s
Run E2E Test for FHIR-search mode with HAPI source SUCCESS 16.902s
Run Batch Pipeline for JDBC mode with HAPI source SUCCESS 31.786s
Run E2E Test for JDBC mode with HAPI source SUCCESS 3.928s
Create views database SUCCESS 612ms
Bring up controller and Spark containers SUCCESS 6m49.772s
Run E2E Test for Dockerized Controller and Spark Thriftserver SUCCESS 1m59.224s
Bring down controller and Spark containers SUCCESS 25.093s
Turn down HAPI Source and Sink Servers SUCCESS 4.519s
Launch OpenMRS Server and HAPI FHIR Sink Server SUCCESS 29.439s
Wait for Servers Start SUCCESS 2m33.948s
Launch Streaming Pipeline SUCCESS 46.38s
Run E2E Test for STREAMING, using OpenMRS Source SUCCESS 5.836s
Upload to OpenMRS SUCCESS 3m52.478s
Run Batch Pipeline FHIR-search mode with OpenMRS source SUCCESS 1m49.408s
Run E2E Test for FHIR-search mode with OpenMRS source SUCCESS 4.004s
Run Batch Pipeline for JDBC mode with OpenMRS source SUCCESS 1m57.936s
Run E2E Test for JDBC mode with OpenMRS source SUCCESS 4.018s
Test Indicators SUCCESS 3m33.782s
Turn down Webserver and HAPI Server SUCCESS 14.987s

Details

starting build "397cb9e4-65ac-40dd-85e1-09b5a0b2c034"

FETCHSOURCE
hint: Using 'master' as the name for the initial branch. This default branch name
hint: is subject to change. To configure the initial branch name to use in all
hint: of your new repositories, which will suppress this warning, call:
hint: 
hint: 	git config --global init.defaultBranch <name>
hint: 
hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and
hint: 'development'. The just-created branch can be renamed via this command:
hint: 
hint: 	git branch -m <name>
Initialized empty Git repository in /workspace/.git/
From https://github.com/google/fhir-data-pipes
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HEAD is now at 838cf9a Bump com.fasterxml.jackson.core:jackson-core from 2.16.1 to 2.16.2
BUILD
Starting Step #0 - "Launch HAPI Source and Sink Servers"
Starting Step #1 - "Compile Bunsen and Pipeline"
Step #0 - "Launch HAPI Source and Sink Servers": Pulling image: docker/compose
Step #1 - "Compile Bunsen and Pipeline": Pulling image: maven:3.8.5-openjdk-17
Step #0 - "Launch HAPI Source and Sink Servers": Using default tag: latest
Step #1 - "Compile Bunsen and Pipeline": 3.8.5-openjdk-17: Pulling from library/maven
Step #0 - "Launch HAPI Source and Sink Servers": latest: Pulling from docker/compose
Step #0 - "Launch HAPI Source and Sink Servers": aad63a933944: Pulling fs layer
Step #0 - "Launch HAPI Source and Sink Servers": b396cd7cbac4: Pulling fs layer
Step #0 - "Launch HAPI Source and Sink Servers": 0426ec0ed60a: Pulling fs layer
Step #0 - "Launch HAPI Source and Sink Servers": 9ac2a98ece5b: Pulling fs layer
Step #0 - "Launch HAPI Source and Sink Servers": 9ac2a98ece5b: Waiting
Step #1 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": a7203ca35e75: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": 81485058ab89: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": b548970362bb: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pulling fs layer
Step #1 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Waiting
Step #1 - "Compile Bunsen and Pipeline": de849f1cfbe6: Waiting
Step #1 - "Compile Bunsen and Pipeline": 81485058ab89: Waiting
Step #1 - "Compile Bunsen and Pipeline": b548970362bb: Waiting
Step #1 - "Compile Bunsen and Pipeline": 3337662e6dc9: Waiting
Step #1 - "Compile Bunsen and Pipeline": dbd02ad382f5: Waiting
Step #1 - "Compile Bunsen and Pipeline": a7203ca35e75: Waiting
Step #0 - "Launch HAPI Source and Sink Servers": b396cd7cbac4: Verifying Checksum
Step #0 - "Launch HAPI Source and Sink Servers": b396cd7cbac4: Download complete
Step #0 - "Launch HAPI Source and Sink Servers": aad63a933944: Verifying Checksum
Step #0 - "Launch HAPI Source and Sink Servers": aad63a933944: Download complete
Step #0 - "Launch HAPI Source and Sink Servers": aad63a933944: Pull complete
Step #0 - "Launch HAPI Source and Sink Servers": 0426ec0ed60a: Verifying Checksum
Step #0 - "Launch HAPI Source and Sink Servers": 0426ec0ed60a: Download complete
Step #0 - "Launch HAPI Source and Sink Servers": b396cd7cbac4: Pull complete
Step #0 - "Launch HAPI Source and Sink Servers": 9ac2a98ece5b: Verifying Checksum
Step #0 - "Launch HAPI Source and Sink Servers": 9ac2a98ece5b: Download complete
Step #0 - "Launch HAPI Source and Sink Servers": 0426ec0ed60a: Pull complete
Step #1 - "Compile Bunsen and Pipeline": de849f1cfbe6: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": de849f1cfbe6: Download complete
Step #0 - "Launch HAPI Source and Sink Servers": 9ac2a98ece5b: Pull complete
Step #0 - "Launch HAPI Source and Sink Servers": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #0 - "Launch HAPI Source and Sink Servers": Status: Downloaded newer image for docker/compose:latest
Step #0 - "Launch HAPI Source and Sink Servers": docker.io/docker/compose:latest
Step #1 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Download complete
Step #1 - "Compile Bunsen and Pipeline": 81485058ab89: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": 81485058ab89: Download complete
Step #1 - "Compile Bunsen and Pipeline": b548970362bb: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": b548970362bb: Download complete
Step #1 - "Compile Bunsen and Pipeline": dbd02ad382f5: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": dbd02ad382f5: Download complete
Step #1 - "Compile Bunsen and Pipeline": a7203ca35e75: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": a7203ca35e75: Download complete
Step #1 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pull complete
Step #1 - "Compile Bunsen and Pipeline": 3337662e6dc9: Verifying Checksum
Step #1 - "Compile Bunsen and Pipeline": 3337662e6dc9: Download complete
Step #1 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pull complete
Step #1 - "Compile Bunsen and Pipeline": a7203ca35e75: Pull complete
Step #0 - "Launch HAPI Source and Sink Servers": Creating volume "docker_hapi-fhir-db" with default driver
Step #0 - "Launch HAPI Source and Sink Servers": Creating volume "docker_hapi-server" with default driver
Step #0 - "Launch HAPI Source and Sink Servers": Creating volume "docker_hapi-data" with default driver
Step #0 - "Launch HAPI Source and Sink Servers": Pulling hapi-server (hapiproject/hapi:latest)...
Step #1 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pull complete
Step #1 - "Compile Bunsen and Pipeline": 81485058ab89: Pull complete
Step #1 - "Compile Bunsen and Pipeline": b548970362bb: Pull complete
Step #1 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pull complete
Step #0 - "Launch HAPI Source and Sink Servers": latest: Pulling from hapiproject/hapi
Step #1 - "Compile Bunsen and Pipeline": Digest: sha256:3a9c30b3af6278a8ae0007d3a3bf00fff80ec3ed7ae4eb9bfa1772853101549b
Step #1 - "Compile Bunsen and Pipeline": Status: Downloaded newer image for maven:3.8.5-openjdk-17
Step #1 - "Compile Bunsen and Pipeline": docker.io/library/maven:3.8.5-openjdk-17
Step #1 - "Compile Bunsen and Pipeline": [INFO] Error stacktraces are turned on.
Step #1 - "Compile Bunsen and Pipeline": [INFO] Scanning for projects...
Step #1 - "Compile Bunsen and Pipeline": [INFO] ------------------------------------------------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] Reactor Build Order:
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] root                                                               [pom]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Bunsen Parent                                                      [pom]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Extension Structure Definitions                                    [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core                                                        [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core R4                                                     [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core Stu3                                                   [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] Bunsen Avro                                                        [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] FHIR Analytics                                                     [pom]
Step #1 - "Compile Bunsen and Pipeline": [INFO] common                                                             [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] batch                                                              [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] streaming                                                          [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] controller                                                         [jar]
Step #1 - "Compile Bunsen and Pipeline": [INFO] coverage                                                           [pom]
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] -------------------< com.google.fhir.analytics:root >-------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building root 0.2.7-SNAPSHOT                                      [1/13]
Step #1 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ root ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-install-plugin:2.4:install (default-install) @ root ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/pom.xml to /root/.m2/repository/com/google/fhir/analytics/root/0.2.7-SNAPSHOT/root-0.2.7-SNAPSHOT.pom
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] ------------------< com.cerner.bunsen:bunsen-parent >-------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building Bunsen Parent 0.5.14-SNAPSHOT                            [2/13]
Step #1 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/bunsen/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (generate-resources) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/src/main/resources
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.43.0:apply (default) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Spotless apply skipped
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] >>> maven-source-plugin:3.3.0:jar (default) > generate-sources @ bunsen-parent >>>
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/bunsen/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] <<< maven-source-plugin:3.3.0:jar (default) < generate-sources @ bunsen-parent <<<
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-source-plugin:3.3.0:jar (default) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-javadoc-plugin:3.6.3:jar (default) @ bunsen-parent ---
Step #0 - "Launch HAPI Source and Sink Servers": Digest: sha256:73ff82fec42e5cbb7e66338d47af09ba91c140e98beeaee41a5459572d5ae1ce
Step #0 - "Launch HAPI Source and Sink Servers": Status: Downloaded newer image for hapiproject/hapi:latest
Step #0 - "Launch HAPI Source and Sink Servers": Pulling sink-server (hapiproject/hapi:v6.1.0)...
Step #1 - "Compile Bunsen and Pipeline": [INFO] Not executing Javadoc as the project is not a Java classpath-capable package
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-install-plugin:2.4:install (default-install) @ bunsen-parent ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/bunsen/pom.xml to /root/.m2/repository/com/cerner/bunsen/bunsen-parent/0.5.14-SNAPSHOT/bunsen-parent-0.5.14-SNAPSHOT.pom
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] ---------< com.cerner.bunsen:extension-structure-definitions >----------
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building Extension Structure Definitions 0.5.14-SNAPSHOT          [3/13]
Step #1 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ jar ]---------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/bunsen/extension-structure-definitions/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (generate-resources) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Copying 110 resources from src/main/resources to target/classes
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (default-resources) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Copying 110 resources from src/main/resources to target/classes
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-compiler-plugin:3.12.1:compile (default-compile) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] No sources to compile
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.43.0:apply (default) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Spotless apply skipped
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:testResources (default-testResources) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/extension-structure-definitions/src/test/resources
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-compiler-plugin:3.12.1:testCompile (default-testCompile) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] No sources to compile
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-surefire-plugin:3.2.5:test (default-test) @ extension-structure-definitions ---
Step #0 - "Launch HAPI Source and Sink Servers": v6.1.0: Pulling from hapiproject/hapi
Step #1 - "Compile Bunsen and Pipeline": [INFO] No tests to run.
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-jar-plugin:3.3.0:jar (default-jar) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building jar: /workspace/bunsen/extension-structure-definitions/target/extension-structure-definitions-0.5.14-SNAPSHOT.jar
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] >>> maven-source-plugin:3.3.0:jar (default) > generate-sources @ extension-structure-definitions >>>
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/bunsen/extension-structure-definitions/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] <<< maven-source-plugin:3.3.0:jar (default) < generate-sources @ extension-structure-definitions <<<
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-source-plugin:3.3.0:jar (default) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building jar: /workspace/bunsen/extension-structure-definitions/target/extension-structure-definitions-0.5.14-SNAPSHOT-sources.jar
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-javadoc-plugin:3.6.3:jar (default) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-install-plugin:2.4:install (default-install) @ extension-structure-definitions ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/bunsen/extension-structure-definitions/target/extension-structure-definitions-0.5.14-SNAPSHOT.jar to /root/.m2/repository/com/cerner/bunsen/extension-structure-definitions/0.5.14-SNAPSHOT/extension-structure-definitions-0.5.14-SNAPSHOT.jar
Step #1 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/bunsen/extension-structure-definitions/pom.xml to /root/.m2/repository/com/cerner/bunsen/extension-structure-definitions/0.5.14-SNAPSHOT/extension-structure-definitions-0.5.14-SNAPSHOT.pom
Step #1 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/bunsen/extension-structure-definitions/target/extension-structure-definitions-0.5.14-SNAPSHOT-sources.jar to /root/.m2/repository/com/cerner/bunsen/extension-structure-definitions/0.5.14-SNAPSHOT/extension-structure-definitions-0.5.14-SNAPSHOT-sources.jar
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] -------------------< com.cerner.bunsen:bunsen-core >--------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] Building Bunsen Core 0.5.14-SNAPSHOT                              [4/13]
Step #1 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ jar ]---------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.11:prepare-agent (default) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.11/org.jacoco.agent-0.8.11-runtime.jar=destfile=/workspace/bunsen/bunsen-core/target/jacoco.exec
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (generate-resources) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/bunsen-core/src/main/resources
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (default-resources) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/bunsen-core/src/main/resources
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-compiler-plugin:3.12.1:compile (default-compile) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Recompiling the module because of changed dependency.
Step #1 - "Compile Bunsen and Pipeline": [INFO] Compiling 23 source files with javac [debug deprecation release 11] to target/classes
Step #1 - "Compile Bunsen and Pipeline": [WARNING] /workspace/bunsen/bunsen-core/src/main/java/com/cerner/bunsen/definitions/FhirConversionSupport.java:[72,54] newInstance() in java.lang.Class has been deprecated
Step #1 - "Compile Bunsen and Pipeline": [INFO] /workspace/bunsen/bunsen-core/src/main/java/com/cerner/bunsen/definitions/PrimitiveConverter.java: Some input files use unchecked or unsafe operations.
Step #1 - "Compile Bunsen and Pipeline": [INFO] /workspace/bunsen/bunsen-core/src/main/java/com/cerner/bunsen/definitions/PrimitiveConverter.java: Recompile with -Xlint:unchecked for details.
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.43.0:apply (default) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Spotless apply skipped
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:testResources (default-testResources) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/bunsen-core/src/test/resources
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-compiler-plugin:3.12.1:testCompile (default-testCompile) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Recompiling the module because of changed dependency.
Step #1 - "Compile Bunsen and Pipeline": [INFO] Compiling 2 source files with javac [debug deprecation release 11] to target/test-classes
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] --- maven-surefire-plugin:3.2.5:test (default-test) @ bunsen-core ---
Step #1 - "Compile Bunsen and Pipeline": [INFO] Surefire report directory: /workspace/bunsen/bunsen-core/target/surefire-reports
Step #1 - "Compile Bunsen and Pipeline": [INFO] Using auto detected provider org.apache.maven.surefire.junit4.JUnit4Provider
Step #1 - "Compile Bunsen and Pipeline": [INFO] 
Step #1 - "Compile Bunsen and Pipeline": [INFO] -------------------------------------------------------
Step #1 - "Compile Bunsen and Pipeline": [INFO]  T E S T S
Step #1 - "Compile Bunsen and Pipeline": [INFO] -------------------------------------------------------
Step #0 - "Launch HAPI Source and Sink Servers": Digest: sha256:253f87bb1f5b7627f8e25f76a4b0aa7a83f31968c6e111ad74d3cc4ad9ae812e
Step #0 - "Launch HAPI Source and Sink Servers": Status: Downloaded newer image for hapiproject/hapi:v6.1.0
Step #0 - "Launch HAPI Source and Sink Servers": Pulling db (postgres:)...
Step #1 - "Compile Bunsen and Pipeline": [INFO] Running com.cerner.bunsen.ProfileMapperProviderTest
Step #1 - "Compile Bunsen and Pipeline": 14:57:20.407 [main] INFO ca.uhn.fhir.util.VersionUtil -- HAPI FHIR version 6.10.4 - Rev 5d6bb47853
Step #1 - "Compile Bunsen and Pipeline": 14:57:20.422 [main] INFO ca.uhn.fhir.context.FhirContext -- Creating new FHIR context for FHIR version [DSTU3]
Step #1 - "Compile Bunsen and Pipeline": 14:57:20.585 [main] INFO ca.uhn.fhir.context.support.DefaultProfileValidationSupport -- Loading structure definitions from classpath: /org/hl7/fhir/dstu3/model/profile/profiles-resources.xml
Step #1 - "Compile Bunsen and Pipeline": 14:57:20.619 [main] INFO ca.uhn.fhir.util.XmlUtil -- Unable to determine StAX implementation: java.xml/META-INF/MANIFEST.MF not found
Step #1 - "Compile Bunsen and Pipeline": 14:57:20.620 [main] DEBUG ca.uhn.fhir.util.XmlUtil -- WstxOutputFactory (Woodstox) not found on classpath
Step #0 - "Launch HAPI Source and Sink Servers": latest: Pulling from library/postgres
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.640 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Age
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.658 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.DateTimeType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.661 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.StringType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.662 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Meta
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.663 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Period
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.663 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Ratio
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.665 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Quantity
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.665 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.PositiveIntType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.665 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.IntegerType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.665 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.BooleanType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.666 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.DataRequirement
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.666 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Narrative
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.667 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Signature
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.668 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Money
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.668 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Count
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.669 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.CodeType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.669 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.HumanName
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.670 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.ElementDefinition
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.674 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Dosage
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.675 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Contributor
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.676 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Reference
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.676 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.SimpleQuantity
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.677 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Identifier
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.678 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.MarkdownType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.678 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Distance
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.678 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.Enumeration
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.678 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Address
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.679 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.ContactDetail
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.679 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.CodeableConcept
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.680 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.Timing
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.680 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning datatype class: org.hl7.fhir.dstu3.model.UsageContext
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.680 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: org.hl7.fhir.dstu3.model.OidType
Step #1 - "Compile Bunsen and Pipeline": 14:57:21.681 [main] DEBUG ca.uhn.fhir.context.ModelScanner -- Scanning resource class: o
...
[Logs truncated due to log size limitations. For full logs, see https://storage.cloud.google.com/cloud-build-gh-logs/log-397cb9e4-65ac-40dd-85e1-09b5a0b2c034.txt.]
...
170 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 175.0 in stage 131.0 (TID 2013)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 176.0 in stage 131.0 (TID 2014) (83b5b9db23f2, executor driver, partition 176, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 164.0 in stage 131.0 (TID 2002) in 9 ms on 83b5b9db23f2 (executor driver) (165/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 176.0 in stage 131.0 (TID 2014)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 166.0 in stage 131.0 (TID 2004) in 8 ms on 83b5b9db23f2 (executor driver) (166/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 165.0 in stage 131.0 (TID 2003) in 9 ms on 83b5b9db23f2 (executor driver) (167/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_171 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 167.0 in stage 131.0 (TID 2005). 107886 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_172 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 177.0 in stage 131.0 (TID 2015) (83b5b9db23f2, executor driver, partition 177, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 177.0 in stage 131.0 (TID 2015)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 167.0 in stage 131.0 (TID 2005) in 8 ms on 83b5b9db23f2 (executor driver) (168/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 168.0 in stage 131.0 (TID 2006). 105320 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 178.0 in stage 131.0 (TID 2016) (83b5b9db23f2, executor driver, partition 178, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 178.0 in stage 131.0 (TID 2016)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 168.0 in stage 131.0 (TID 2006) in 9 ms on 83b5b9db23f2 (executor driver) (169/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 169.0 in stage 131.0 (TID 2007). 104206 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 179.0 in stage 131.0 (TID 2017) (83b5b9db23f2, executor driver, partition 179, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 179.0 in stage 131.0 (TID 2017)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 169.0 in stage 131.0 (TID 2007) in 8 ms on 83b5b9db23f2 (executor driver) (170/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_173 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 170.0 in stage 131.0 (TID 2008). 115118 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 180.0 in stage 131.0 (TID 2018) (83b5b9db23f2, executor driver, partition 180, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 171.0 in stage 131.0 (TID 2009). 107110 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 180.0 in stage 131.0 (TID 2018)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 172.0 in stage 131.0 (TID 2010). 107348 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 181.0 in stage 131.0 (TID 2019) (83b5b9db23f2, executor driver, partition 181, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 181.0 in stage 131.0 (TID 2019)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 182.0 in stage 131.0 (TID 2020) (83b5b9db23f2, executor driver, partition 182, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 170.0 in stage 131.0 (TID 2008) in 9 ms on 83b5b9db23f2 (executor driver) (171/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_176 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 182.0 in stage 131.0 (TID 2020)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 172.0 in stage 131.0 (TID 2010) in 8 ms on 83b5b9db23f2 (executor driver) (172/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_174 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 171.0 in stage 131.0 (TID 2009) in 9 ms on 83b5b9db23f2 (executor driver) (173/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_175 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_177 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 173.0 in stage 131.0 (TID 2011). 108342 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_178 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 183.0 in stage 131.0 (TID 2021) (83b5b9db23f2, executor driver, partition 183, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 183.0 in stage 131.0 (TID 2021)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 176.0 in stage 131.0 (TID 2014). 101955 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 173.0 in stage 131.0 (TID 2011) in 9 ms on 83b5b9db23f2 (executor driver) (174/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_179 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 184.0 in stage 131.0 (TID 2022) (83b5b9db23f2, executor driver, partition 184, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 184.0 in stage 131.0 (TID 2022)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_181 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 176.0 in stage 131.0 (TID 2014) in 8 ms on 83b5b9db23f2 (executor driver) (175/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 175.0 in stage 131.0 (TID 2013). 100477 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 174.0 in stage 131.0 (TID 2012). 112785 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_180 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 185.0 in stage 131.0 (TID 2023) (83b5b9db23f2, executor driver, partition 185, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 185.0 in stage 131.0 (TID 2023)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 186.0 in stage 131.0 (TID 2024) (83b5b9db23f2, executor driver, partition 186, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 186.0 in stage 131.0 (TID 2024)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_182 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 174.0 in stage 131.0 (TID 2012) in 10 ms on 83b5b9db23f2 (executor driver) (176/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 175.0 in stage 131.0 (TID 2013) in 9 ms on 83b5b9db23f2 (executor driver) (177/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 177.0 in stage 131.0 (TID 2015). 104632 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 187.0 in stage 131.0 (TID 2025) (83b5b9db23f2, executor driver, partition 187, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 187.0 in stage 131.0 (TID 2025)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 177.0 in stage 131.0 (TID 2015) in 13 ms on 83b5b9db23f2 (executor driver) (178/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 178.0 in stage 131.0 (TID 2016). 102120 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 188.0 in stage 131.0 (TID 2026) (83b5b9db23f2, executor driver, partition 188, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 179.0 in stage 131.0 (TID 2017). 108597 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 188.0 in stage 131.0 (TID 2026)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 178.0 in stage 131.0 (TID 2016) in 13 ms on 83b5b9db23f2 (executor driver) (179/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 181.0 in stage 131.0 (TID 2019). 109064 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 189.0 in stage 131.0 (TID 2027) (83b5b9db23f2, executor driver, partition 189, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 189.0 in stage 131.0 (TID 2027)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_184 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 190.0 in stage 131.0 (TID 2028) (83b5b9db23f2, executor driver, partition 190, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 180.0 in stage 131.0 (TID 2018). 100287 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 179.0 in stage 131.0 (TID 2017) in 14 ms on 83b5b9db23f2 (executor driver) (180/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_183 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 190.0 in stage 131.0 (TID 2028)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 191.0 in stage 131.0 (TID 2029) (83b5b9db23f2, executor driver, partition 191, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 182.0 in stage 131.0 (TID 2020). 110461 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 191.0 in stage 131.0 (TID 2029)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 192.0 in stage 131.0 (TID 2030) (83b5b9db23f2, executor driver, partition 192, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 180.0 in stage 131.0 (TID 2018) in 13 ms on 83b5b9db23f2 (executor driver) (181/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 192.0 in stage 131.0 (TID 2030)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 181.0 in stage 131.0 (TID 2019) in 13 ms on 83b5b9db23f2 (executor driver) (182/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 182.0 in stage 131.0 (TID 2020) in 13 ms on 83b5b9db23f2 (executor driver) (183/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_187 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_186 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_185 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_124_piece0 on 83b5b9db23f2:37315 in memory (size: 34.9 KiB, free: 328.7 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 184.0 in stage 131.0 (TID 2022). 104461 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_188 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 193.0 in stage 131.0 (TID 2031) (83b5b9db23f2, executor driver, partition 193, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_189 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 183.0 in stage 131.0 (TID 2021). 104441 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 193.0 in stage 131.0 (TID 2031)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 184.0 in stage 131.0 (TID 2022) in 19 ms on 83b5b9db23f2 (executor driver) (184/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_126_piece0 on 83b5b9db23f2:37315 in memory (size: 4.0 MiB, free: 332.7 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 194.0 in stage 131.0 (TID 2032) (83b5b9db23f2, executor driver, partition 194, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_126_piece3 on 83b5b9db23f2:37315 in memory (size: 4.0 MiB, free: 336.7 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_191 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 194.0 in stage 131.0 (TID 2032)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 183.0 in stage 131.0 (TID 2021) in 19 ms on 83b5b9db23f2 (executor driver) (185/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_126_piece4 on 83b5b9db23f2:37315 in memory (size: 4.0 MiB, free: 340.6 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_190 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_126_piece2 on 83b5b9db23f2:37315 in memory (size: 4.0 MiB, free: 344.6 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_126_piece1 on 83b5b9db23f2:37315 in memory (size: 4.0 MiB, free: 348.6 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_192 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 187.0 in stage 131.0 (TID 2025). 105407 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 185.0 in stage 131.0 (TID 2023). 111194 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 186.0 in stage 131.0 (TID 2024). 110965 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_127_piece0 on 83b5b9db23f2:37315 in memory (size: 37.5 KiB, free: 348.7 MiB)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 188.0 in stage 131.0 (TID 2026). 104974 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 195.0 in stage 131.0 (TID 2033) (83b5b9db23f2, executor driver, partition 195, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 195.0 in stage 131.0 (TID 2033)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 196.0 in stage 131.0 (TID 2034) (83b5b9db23f2, executor driver, partition 196, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 196.0 in stage 131.0 (TID 2034)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 189.0 in stage 131.0 (TID 2027). 104437 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 197.0 in stage 131.0 (TID 2035) (83b5b9db23f2, executor driver, partition 197, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 187.0 in stage 131.0 (TID 2025) in 19 ms on 83b5b9db23f2 (executor driver) (186/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 197.0 in stage 131.0 (TID 2035)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 191.0 in stage 131.0 (TID 2029). 106004 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 198.0 in stage 131.0 (TID 2036) (83b5b9db23f2, executor driver, partition 198, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 185.0 in stage 131.0 (TID 2023) in 21 ms on 83b5b9db23f2 (executor driver) (187/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 198.0 in stage 131.0 (TID 2036)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 190.0 in stage 131.0 (TID 2028). 104328 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 186.0 in stage 131.0 (TID 2024) in 20 ms on 83b5b9db23f2 (executor driver) (188/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Starting task 199.0 in stage 131.0 (TID 2037) (83b5b9db23f2, executor driver, partition 199, PROCESS_LOCAL, 7615 bytes) 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 188.0 in stage 131.0 (TID 2026) in 15 ms on 83b5b9db23f2 (executor driver) (189/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_193 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Running task 199.0 in stage 131.0 (TID 2037)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_194 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 192.0 in stage 131.0 (TID 2030). 110720 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 189.0 in stage 131.0 (TID 2027) in 15 ms on 83b5b9db23f2 (executor driver) (190/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 191.0 in stage 131.0 (TID 2029) in 14 ms on 83b5b9db23f2 (executor driver) (191/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 190.0 in stage 131.0 (TID 2028) in 15 ms on 83b5b9db23f2 (executor driver) (192/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 192.0 in stage 131.0 (TID 2030) in 14 ms on 83b5b9db23f2 (executor driver) (193/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_198 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_196 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_199 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_195 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 193.0 in stage 131.0 (TID 2031). 110422 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManager: Found block rdd_211_197 locally
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 194.0 in stage 131.0 (TID 2032). 109528 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 193.0 in stage 131.0 (TID 2031) in 9 ms on 83b5b9db23f2 (executor driver) (194/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 194.0 in stage 131.0 (TID 2032) in 8 ms on 83b5b9db23f2 (executor driver) (195/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 198.0 in stage 131.0 (TID 2036). 101875 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 196.0 in stage 131.0 (TID 2034). 110789 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 199.0 in stage 131.0 (TID 2037). 102382 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 195.0 in stage 131.0 (TID 2033). 113060 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 198.0 in stage 131.0 (TID 2036) in 7 ms on 83b5b9db23f2 (executor driver) (196/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 196.0 in stage 131.0 (TID 2034) in 8 ms on 83b5b9db23f2 (executor driver) (197/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 195.0 in stage 131.0 (TID 2033) in 8 ms on 83b5b9db23f2 (executor driver) (198/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 199.0 in stage 131.0 (TID 2037) in 6 ms on 83b5b9db23f2 (executor driver) (199/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO Executor: Finished task 197.0 in stage 131.0 (TID 2035). 110419 bytes result sent to driver
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSetManager: Finished task 197.0 in stage 131.0 (TID 2035) in 8 ms on 83b5b9db23f2 (executor driver) (200/200)
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSchedulerImpl: Removed TaskSet 131.0, whose tasks have all completed, from pool 
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO DAGScheduler: ResultStage 131 (toPandas at /workspace/dwh/query_lib_spark.py:147) finished in 0.182 s
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO DAGScheduler: Job 85 is finished. Cancelling potential speculative or zombie tasks for this job
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO TaskSchedulerImpl: Killing all running tasks in stage 131: Stage finished
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO DAGScheduler: Job 85 finished: toPandas at /workspace/dwh/query_lib_spark.py:147, took 0.185608 s
Step #25 - "Test Indicators": 24/03/12 15:31:56 INFO BlockManagerInfo: Removed broadcast_133_piece0 on 83b5b9db23f2:37315 in memory (size: 36.0 KiB, free: 348.7 MiB)
Step #25 - "Test Indicators": [INDICATORS_LOG 2024-03-12 15:31:57.759686] patient_obs_view size= 150109
Step #25 - "Test Indicators": [INDICATORS_LOG 2024-03-12 15:31:59.891181] Number of rows in TX_TB temp_df= 6404
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO SparkContext: Invoking stop() from shutdown hook
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO SparkContext: SparkContext is stopping with exitCode 0.
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO SparkUI: Stopped Spark web UI at http://83b5b9db23f2:4040
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO MemoryStore: MemoryStore cleared
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO BlockManager: BlockManager stopped
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO BlockManagerMaster: BlockManagerMaster stopped
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO SparkContext: Successfully stopped SparkContext
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO ShutdownHookManager: Shutdown hook called
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO ShutdownHookManager: Deleting directory /tmp/spark-0d9bb564-396b-4a3e-9a0c-914f211a2a12/pyspark-ba09b618-9e1d-4f38-8055-6a9fdf906da5
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO ShutdownHookManager: Deleting directory /tmp/spark-c5a2033b-80f4-4d8b-a3a2-e1d7c5b99aa1
Step #25 - "Test Indicators": 24/03/12 15:32:00 INFO ShutdownHookManager: Deleting directory /tmp/spark-0d9bb564-396b-4a3e-9a0c-914f211a2a12
Step #25 - "Test Indicators": Suppressed, non-suppressed, none, male_25 numbers are : 8,752,0,2
Step #25 - "Test Indicators": Suppressed, non-suppressed, none, male_25 ratios are : 0.0105,0.989,0,0.00263
Step #25 - "Test Indicators": TX_NEW, non-TX_NEW, none, male_25 numbers are : 95,439,0,24
Step #25 - "Test Indicators": TX_NEW, non-TX_NEW, none, male_25 ratios are : 0.178,0.822,0,0.0449
Step #25 - "Test Indicators": TB_STAT, non-TB_STAT, none, male_25 numbers are : 86,448,0,29
Step #25 - "Test Indicators": TB_STAT, non-TB_STAT, none, male_25 ratios are : 0.161,0.839,0,0.0543
Step #25 - "Test Indicators": TX_CURR, non-TX_CURR, none, male_25 numbers are : 116,418,0,29
Step #25 - "Test Indicators": TX_CURR, non-TX_CURR, none, male_25 ratios are : 0.217,0.783,0,0.0543
Step #25 - "Test Indicators": TB_ART, non-TB_ART, none, male_25 numbers are : 43,491,0,13
Step #25 - "Test Indicators": TB_ART, non-TB_ART, none, male_25 ratios are : 0.0805,0.919,0,0.0243
Step #25 - "Test Indicators": TB_PREV, non-TB_PREV, none, male_25 numbers are : 57,6.35e+03,0,8
Step #25 - "Test Indicators": TB_PREV, non-TB_PREV, none, male_25 ratios are : 0.0089,0.991,0,0.00125
Step #25 - "Test Indicators": TX_TB, non-TX_TB, none, male_25 numbers are : 0,6.4e+03,0,0
Step #25 - "Test Indicators": TX_TB, non-TX_TB, none, male_25 ratios are : 0,1,0,0
Step #25 - "Test Indicators": SUCCESS!
Finished Step #25 - "Test Indicators"
Starting Step #26 - "Turn down Webserver and HAPI Server"
Step #26 - "Turn down Webserver and HAPI Server": Already have image (with digest): docker/compose
Step #26 - "Turn down Webserver and HAPI Server": Stopping openmrs            ... 
Step #26 - "Turn down Webserver and HAPI Server": Stopping openmrs-fhir-mysql ... 
Step #26 - "Turn down Webserver and HAPI Server": Stopping sink-server        ... 
Step #26 - "Turn down Webserver and HAPI Server": �[1A�[2K
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Stopping openmrs-fhir-mysql ... �[32mdone�[0m
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Step #26 - "Turn down Webserver and HAPI Server": Removing openmrs-fhir-mysql ... 
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Finished Step #26 - "Turn down Webserver and HAPI Server"
PUSH
Pushing us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/streaming-pipeline:838cf9a
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DONE
Step #0 - "Launch HAPI Source and Sink Servers": �[3A�[2K
Creating hapi-server  ... �[32mdone�[0m
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Creating sink-server  ... �[32mdone�[0m
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Creating hapi-fhir-db ... �[32mdone�[0m
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Step #12 - "Bring up controller and Spark containers": �[1A�[2K
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Step #16 - "Launch OpenMRS Server and HAPI FHIR Sink Server": �[1A�[2K
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Build Log: https://storage.cloud.google.com/cloud-build-gh-logs/log-397cb9e4-65ac-40dd-85e1-09b5a0b2c034.txt