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Increase default number of bases per shard.
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This yields a reasonable number of tasks for sharded jobs running over the whole genome.
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deflaux committed Mar 13, 2015
1 parent ee2f74a commit c4acecd
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/main/java/com/google/cloud/genomics/utils/Contig.java
Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@ public class Contig implements Serializable {

private static final long serialVersionUID = -1730387112193404207L;

public static final long DEFAULT_NUMBER_OF_BASES_PER_SHARD = 100000;
public static final long DEFAULT_NUMBER_OF_BASES_PER_SHARD = 1000000;

public enum SexChromosomeFilter { INCLUDE_XY, EXCLUDE_XY }

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