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Senior project designed to take in a large text file of DNA sequences to parse, filter, and format for NCBI's BLAST tools.

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FASTA-Parser

Program designed to take in a large text file of DNA sequences and parse each sequence under two requirements:

  1. The sequence is not empty/length of 0 nucleotides.
  2. The sequence is at least 250 nucleotides in length.

The program also outputs the resulting DNA sequences in a format that is easily interpreted by NCBI's BLAST tools.

Database:

  • Directory containing all the DNA sequences in a text file as a database for the program

Output:

  • Directory to store the output of the program in a text file

src:

  • Directory containing all the source code in Java

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Senior project designed to take in a large text file of DNA sequences to parse, filter, and format for NCBI's BLAST tools.

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