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Add 12S marker gene #32

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hariszaf opened this issue Dec 2, 2021 · 3 comments
Closed

Add 12S marker gene #32

hariszaf opened this issue Dec 2, 2021 · 3 comments
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enhancement New feature or request

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@hariszaf
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hariszaf commented Dec 2, 2021

Using reference databases from this repo, PEMA could integrate the analysis of the 12S rRNA marker gene.
@hariszaf hariszaf added the enhancement New feature or request label Dec 2, 2021
hariszaf added a commit that referenced this issue Dec 2, 2021
@hariszaf
add 12S marker gene (issue #32) and integrate PR2 db (issue #21)
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@hariszaf
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hariszaf commented Dec 2, 2021

PEMA can now run analyses for 12S rRNA data too!

For the time being, this is possible only using the Swarm algorithm, not vsearch.

@cpavloud do you think this is a problem ?

In case it is, I could work on that in a future version of pema, not that soon.

@cpavloud
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cpavloud commented Dec 3, 2021

I think it is just fine for now!

@hariszaf
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hariszaf commented Dec 4, 2021

Nice!
This issue is now resolved.

@hariszaf hariszaf closed this as completed Dec 4, 2021
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@cpavloud @hariszaf