No output file

[drs357]

Hello, I finished the fmlrc run, however, there was no output file. This might be a really dumb mistake on my part, do you have to specify an output file name? Are outputs only in .fa format?

Thanks

[holtjma]

It requires a specific ordering of the input and output files as describing in the README. And yes, only fasta (.fa) format is supported for the output file.

[drs357]

I believe I ran it wrong then, so the only inputs are the .npy file and the long reads, and the output is just the corrected reads?

[holtjma]

Yes, that's correct, there is an example here.

[holtjma]

Closing due to inactivity