delphiepidata

Query the ‘CMU’ ‘DELPHI’ Epidemiological Data ‘API’

Description

The ‘CMU’ ‘DELPHI’ (https://delphi.midas.cs.cmu.edu/) service provides an aggregated, central point of access to influenza-like illness (‘ILI’) related data sources. Methods are provided to query all supported endpoints.

• DELPHI API docs: https://github.com/cmu-delphi/delphi-epidata
• DELPHI: https://delphi.midas.cs.cmu.edu/
• URL: https://gitlab.com/hrbrmstr/delphiepidata
• BugReports: https://gitlab.com/hrbrmstr/delphiepidata/issues

What’s Inside The Tin

The following functions are implemented:

• cdc: Fetch CDC page hits
• delphi: Fetch Delphi’s forecast
• dengue_nowcast: Fetch Delphi’s PAHO Dengue nowcast
• dengue_sensors: Fetch Delphi’s digital surveillance sensors
• flusurv: Fetch FluSurv data
• fluview: Fetch FluView data
• fluview_clinical: Fetch FluView virological data
• gft: Fetch Google Flu Trends data
• ght: Fetch Google Health Trends data
• meta: Fetch API metadata
• meta_norostat: Fetch NoroSTAT metadata
• nidss_dengue: Fetch NIDSS dengue data
• nidss_flu: Fetch NIDSS flu data
• norostat: Fetch NoroSTAT data (point data, no min/max)
• nowcast: Fetch Delphi’s wILI nowcast
• quidel: Fetch Quidel data
• sensors: Fetch Delphi’s digital surveillance sensors
• twitter: Fetch HealthTweets data
• wiki: Fetch Wikipedia access data

Installation

devtools::install_git("https://sr.ht.com/~hrbrmstr/delphiepidata.git")
# or
devtools::install_gitlab("hrbrmstr/delphiepidata")
# or (if you must)
devtools::install_github("hrbrmstr/delphiepidata")

Usage

library(delphiepidata)

# current version
packageVersion("delphiepidata")
## [1] '0.1.0'

delphiepidata Metrics

Lang	# Files	(%)	LoC	(%)	Blank lines	(%)	# Lines	(%)
R	9	0.9	374	0.98	45	0.7	206	0.79
Rmd	1	0.1	8	0.02	19	0.3	54	0.21

Code of Conduct

Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.