Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Shit #33

Open
wants to merge 682 commits into
base: master
Choose a base branch
from
Open

Shit #33

wants to merge 682 commits into from
This pull request is big! We’re only showing the most recent 250 commits.

Commits on Mar 1, 2012

  1. writing distsamp likelihood in C++

    @rbchan
    rbchan committed Mar 1, 2012
    Configuration menu
    Copy the full SHA
    62ffeaa View commit details
    Browse the repository at this point in the history

  2. C++ like

    @rbchan
    rbchan committed Mar 1, 2012
    Configuration menu
    Copy the full SHA
    98e0960 View commit details
    Browse the repository at this point in the history

  3. ready?

    @rbchan
    rbchan committed Mar 1, 2012
    Configuration menu
    Copy the full SHA
    b29a45d View commit details
    Browse the repository at this point in the history

  4. nope but it is now and much much faster. Conflict w armadillo though

    @rbchan
    rbchan committed Mar 1, 2012
    Configuration menu
    Copy the full SHA
    1a1e89b View commit details
    Browse the repository at this point in the history

  5. hm

    @rbchan
    rbchan committed Mar 1, 2012
    Configuration menu
    Copy the full SHA
    db1c213 View commit details
    Browse the repository at this point in the history

Commits on Mar 2, 2012

  1. no fix yet

    @rbchan
    rbchan committed Mar 2, 2012
    Configuration menu
    Copy the full SHA
    1a157e6 View commit details
    Browse the repository at this point in the history

Commits on Mar 5, 2012

  1. argh

    @rbchan
    rbchan committed Mar 5, 2012
    Configuration menu
    Copy the full SHA
    98c8d9d View commit details
    Browse the repository at this point in the history

Commits on Mar 14, 2012

  1. C++ likelihood for distsamp now uses Rcpp instead of RcppArmadillo

    @rbchan
    rbchan committed Mar 14, 2012
    Configuration menu
    Copy the full SHA
    d9b0256 View commit details
    Browse the repository at this point in the history

  2. decreased rel.tol and removed old arma code

    @rbchan
    rbchan committed Mar 14, 2012
    Configuration menu
    Copy the full SHA
    573474d View commit details
    Browse the repository at this point in the history

  3. predict avoids multivariate delta method now

    @rbchan
    rbchan committed Mar 14, 2012
    Configuration menu
    Copy the full SHA
    f8a0e35 View commit details
    Browse the repository at this point in the history

  4. fixed predict for signatures

    @rbchan
    rbchan committed Mar 14, 2012
    Configuration menu
    Copy the full SHA
    ac06d2b View commit details
    Browse the repository at this point in the history

Commits on Mar 16, 2012

  1. contemplating getting rid of reshape

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    7ea855d View commit details
    Browse the repository at this point in the history

  2. Suggests raster

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    71a295c View commit details
    Browse the repository at this point in the history

  3. added method to predict using RasterStacks

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    62edefd View commit details
    Browse the repository at this point in the history

  4. added raster predict methods for other types of fitted models

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    a318532 View commit details
    Browse the repository at this point in the history

  5. fixed bug in simulate and ranef methods for gmultmix when T=1

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    4fafbd5 View commit details
    Browse the repository at this point in the history

  6. bug fix in simulate method for gmultmix

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    f03bf0f View commit details
    Browse the repository at this point in the history

  7. testing

    @rbchan
    rbchan committed Mar 16, 2012
    Configuration menu
    Copy the full SHA
    ffb024b View commit details
    Browse the repository at this point in the history

Commits on Mar 17, 2012

  1. fixed new predict method for colext fits

    @rbchan
    rbchan committed Mar 17, 2012
    Configuration menu
    Copy the full SHA
    bad50e7 View commit details
    Browse the repository at this point in the history

  2. added unit test for predict. Working on factors in raster stack

    @rbchan
    rbchan committed Mar 17, 2012
    Configuration menu
    Copy the full SHA
    213ef7a View commit details
    Browse the repository at this point in the history

Commits on Mar 19, 2012

  1. Merge branch 'master' of github.com:rbchan/unmarked

    @rbchan
    rbchan committed Mar 19, 2012
    Configuration menu
    Copy the full SHA
    e47b9d3 View commit details
    Browse the repository at this point in the history

Commits on Mar 20, 2012

  1. vignette edits

    @rbchan
    rbchan committed Mar 20, 2012
    Configuration menu
    Copy the full SHA
    ca8a012 View commit details
    Browse the repository at this point in the history

Commits on Mar 21, 2012

  1. cap-recap vignette work

    @rbchan
    rbchan committed Mar 21, 2012
    Configuration menu
    Copy the full SHA
    80b1849 View commit details
    Browse the repository at this point in the history

  2. added small constant to occu likelihood

    @rbchan
    rbchan committed Mar 21, 2012
    Configuration menu
    Copy the full SHA
    5032231 View commit details
    Browse the repository at this point in the history

  3. unit tests

    @rbchan
    rbchan committed Mar 21, 2012
    Configuration menu
    Copy the full SHA
    dadb69c View commit details
    Browse the repository at this point in the history

  4. added SDM vignette and modified predict methods

    @rbchan
    rbchan committed Mar 21, 2012
    Configuration menu
    Copy the full SHA
    df47d4c View commit details
    Browse the repository at this point in the history

  5. vignette edits

    @rbchan
    rbchan committed Mar 21, 2012
    Configuration menu
    Copy the full SHA
    e749248 View commit details
    Browse the repository at this point in the history

Commits on Mar 22, 2012

  1. added tests to formatDistData

    @rbchan
    rbchan committed Mar 22, 2012
    Configuration menu
    Copy the full SHA
    68eb0c6 View commit details
    Browse the repository at this point in the history

  2. vignette edits

    @rbchan
    rbchan committed Mar 22, 2012
    Configuration menu
    Copy the full SHA
    f522208 View commit details
    Browse the repository at this point in the history

  3. first draft of species distribution vignette

    @rbchan
    rbchan committed Mar 22, 2012
    Configuration menu
    Copy the full SHA
    59db205 View commit details
    Browse the repository at this point in the history

  4. R CMD INSTALL can't find crossbill data in vignette

    @rbchan
    rbchan committed Mar 22, 2012
    Configuration menu
    Copy the full SHA
    1a584d4 View commit details
    Browse the repository at this point in the history

Commits on Mar 23, 2012

  1. added help file for crossbill data and fixed vignette

    @rbchan
    rbchan committed Mar 23, 2012
    Configuration menu
    Copy the full SHA
    a7ea35c View commit details
    Browse the repository at this point in the history

  2. cleanup

    @rbchan
    rbchan committed Mar 23, 2012
    Configuration menu
    Copy the full SHA
    991e6ce View commit details
    Browse the repository at this point in the history

  3. modified formatDistData to allow for replicate surveys

    @rbchan
    rbchan committed Mar 23, 2012
    Configuration menu
    Copy the full SHA
    0f070a3 View commit details
    Browse the repository at this point in the history

  4. updated formatDistData documentation

    @rbchan
    rbchan committed Mar 23, 2012
    Configuration menu
    Copy the full SHA
    1d7b7c4 View commit details
    Browse the repository at this point in the history

  5. testing

    @rbchan
    rbchan committed Mar 23, 2012
    Configuration menu
    Copy the full SHA
    223df2e View commit details
    Browse the repository at this point in the history

Commits on Mar 26, 2012

  1. fixed colnames returned by formatDistData when T>1

    @rbchan
    rbchan committed Mar 26, 2012
    Configuration menu
    Copy the full SHA
    7076dde View commit details
    Browse the repository at this point in the history

Commits on Mar 29, 2012

  1. fixed spp-dist vignette so that it doesn't depend on swiss data

    @rbchan
    rbchan committed Mar 29, 2012
    Configuration menu
    Copy the full SHA
    69375fc View commit details
    Browse the repository at this point in the history

  2. removed crossbill data. removed execution of colext in vignette

    @rbchan
    rbchan committed Mar 29, 2012
    Configuration menu
    Copy the full SHA
    55008fe View commit details
    Browse the repository at this point in the history

Commits on Mar 30, 2012

  1. shortened vignette names

    @rbchan
    rbchan committed Mar 30, 2012
    Configuration menu
    Copy the full SHA
    bb4d4c6 View commit details
    Browse the repository at this point in the history

Commits on Apr 17, 2012

  1. added Swiss landscape data. Need to format and compress it

    @rbchan
    rbchan committed Apr 17, 2012
    Configuration menu
    Copy the full SHA
    ae5d797 View commit details
    Browse the repository at this point in the history

Commits on Jun 20, 2012

  1. fixing predict for ZIP models

    @rbchan
    rbchan committed Jun 20, 2012
    Configuration menu
    Copy the full SHA
    3ea80b3 View commit details
    Browse the repository at this point in the history

  2. adding 'level' argument to predict

    @rbchan
    rbchan committed Jun 20, 2012
    Configuration menu
    Copy the full SHA
    23180f1 View commit details
    Browse the repository at this point in the history

  3. bump version

    @rbchan
    rbchan committed Jun 20, 2012
    Configuration menu
    Copy the full SHA
    f637a51 View commit details
    Browse the repository at this point in the history

Commits on Jun 21, 2012

  1. added test for level argument in predict

    @rbchan
    rbchan committed Jun 21, 2012
    Configuration menu
    Copy the full SHA
    4ed63f1 View commit details
    Browse the repository at this point in the history

  2. predict methods now partially deal with ZIP models

    @rbchan
    rbchan committed Jun 21, 2012
    Configuration menu
    Copy the full SHA
    8e9ed5c View commit details
    Browse the repository at this point in the history

  3. fixed ranef for pcountOpen(..., dynamics='trend')

    @rbchan
    rbchan committed Jun 21, 2012
    Configuration menu
    Copy the full SHA
    ac188fe View commit details
    Browse the repository at this point in the history

Commits on Jun 22, 2012

  1. Merge branch 'master' into distsamp

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    0ddbd11 View commit details
    Browse the repository at this point in the history

  2. removed old version of Swiss landscape data

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    ebbd9d1 View commit details
    Browse the repository at this point in the history

  3. added the Swiss landscape data

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    5387b60 View commit details
    Browse the repository at this point in the history

  4. added the Santa Cruz landscape data

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    1d10627 View commit details
    Browse the repository at this point in the history

  5. added the Fall 2008 scrub-jay data

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    0682f4a View commit details
    Browse the repository at this point in the history

  6. added ISSJ analysis to distsamp example

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    a782d4b View commit details
    Browse the repository at this point in the history

  7. editing spp-dist vignette

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    09e0a4f View commit details
    Browse the repository at this point in the history

  8. fixed bug in predict method related to offsets

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    2e2f88c View commit details
    Browse the repository at this point in the history

  9. vignette work

    @rbchan
    rbchan committed Jun 22, 2012
    Configuration menu
    Copy the full SHA
    3254be2 View commit details
    Browse the repository at this point in the history

Commits on Jun 23, 2012

  1. barge

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    7ff20ea View commit details
    Browse the repository at this point in the history

  2. added crossbill data. Editing vignette

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    fe03bef View commit details
    Browse the repository at this point in the history

  3. vignette work

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    fed0a8c View commit details
    Browse the repository at this point in the history

  4. spp-dist vignette is good enough

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    2cd7627 View commit details
    Browse the repository at this point in the history

  5. aa

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    c81c818 View commit details
    Browse the repository at this point in the history

  6. Merge branch 'master' into distsamp

    @rbchan
    rbchan committed Jun 23, 2012
    Configuration menu
    Copy the full SHA
    bdc3c72 View commit details
    Browse the repository at this point in the history

Commits on Jun 24, 2012

  1. added other C++ distance detection functions

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    837b541 View commit details
    Browse the repository at this point in the history

  2. Work on C++ likelihood for distsamp

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    d714bd6 View commit details
    Browse the repository at this point in the history

  3. distsamp

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    96d42e8 View commit details
    Browse the repository at this point in the history

  4. halfnorm, exp, and uniform det funs added in C++

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    06b1f40 View commit details
    Browse the repository at this point in the history

  5. C++ distsamp almost ready

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    8c3d1b7 View commit details
    Browse the repository at this point in the history

  6. passes R CMD check

    @rbchan
    rbchan committed Jun 24, 2012
    Configuration menu
    Copy the full SHA
    d89cea0 View commit details
    Browse the repository at this point in the history

Commits on Jun 25, 2012

  1. v0.9-8 submitted to CRAN

    @rbchan
    rbchan committed Jun 25, 2012
    Configuration menu
    Copy the full SHA
    ad6ea6f View commit details
    Browse the repository at this point in the history

  2. changed a latex tag to suit CRAN

    @rbchan
    rbchan committed Jun 25, 2012
    Configuration menu
    Copy the full SHA
    53db2a4 View commit details
    Browse the repository at this point in the history

Commits on Jul 7, 2012

  1. copied src files

    @rbchan
    rbchan committed Jul 7, 2012
    Configuration menu
    Copy the full SHA
    44ff5e9 View commit details
    Browse the repository at this point in the history

  2. Trying to void problems on linux/solaris

    @rbchan
    rbchan committed Jul 7, 2012
    Configuration menu
    Copy the full SHA
    703af91 View commit details
    Browse the repository at this point in the history

Commits on Aug 23, 2012

  1. pco

    @rbchan
    rbchan committed Aug 23, 2012
    Configuration menu
    Copy the full SHA
    dd0f2a8 View commit details
    Browse the repository at this point in the history

Commits on Sep 4, 2012

  1. checking colext with missing values

    @rbchan
    rbchan committed Sep 4, 2012
    Configuration menu
    Copy the full SHA
    088f827 View commit details
    Browse the repository at this point in the history

Commits on Sep 13, 2012

  1. added function to fit temporary emigration model to binomial data

    @rbchan
    rbchan committed Sep 13, 2012
    Configuration menu
    Copy the full SHA
    dfa14ea View commit details
    Browse the repository at this point in the history

  2. function seems to work. Variance estimates are very high

    @rbchan
    rbchan committed Sep 13, 2012
    Configuration menu
    Copy the full SHA
    c5002ff View commit details
    Browse the repository at this point in the history

Commits on Sep 14, 2012

  1. fixed the likelihood for gpcount

    @rbchan
    rbchan committed Sep 14, 2012
    Configuration menu
    Copy the full SHA
    08f163b View commit details
    Browse the repository at this point in the history

Commits on Sep 20, 2012

  1. package now builds with gpcount. example runs

    @rbchan
    rbchan committed Sep 20, 2012
    Configuration menu
    Copy the full SHA
    fcc9323 View commit details
    Browse the repository at this point in the history

  2. added C++ version of likelihood. Not ready yet

    @rbchan
    rbchan committed Sep 20, 2012
    Configuration menu
    Copy the full SHA
    f10c147 View commit details
    Browse the repository at this point in the history

Commits on Sep 24, 2012

  1. nll_gpcount working

    @rbchan
    rbchan committed Sep 24, 2012
    Configuration menu
    Copy the full SHA
    a60ea8e View commit details
    Browse the repository at this point in the history

  2. speed-up nll_gpcount

    @rbchan
    rbchan committed Sep 24, 2012
    Configuration menu
    Copy the full SHA
    f44ef58 View commit details
    Browse the repository at this point in the history

Commits on Sep 25, 2012

  1. added getP method for gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    72d7154 View commit details
    Browse the repository at this point in the history

  2. added fitted method for gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    9ba1ede View commit details
    Browse the repository at this point in the history

  3. added simulate method for gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    e584289 View commit details
    Browse the repository at this point in the history

  4. added ranef method for gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    5b2eb19 View commit details
    Browse the repository at this point in the history

  5. added sim.gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    61fbd3d View commit details
    Browse the repository at this point in the history

  6. fixed mixture='NB' in gpcount. fixed unmarkedFrameGPC constructor

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    7bb77ae View commit details
    Browse the repository at this point in the history

  7. fixed NA handling in likelihood. Added more sim tests

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    c0a95b6 View commit details
    Browse the repository at this point in the history

  8. final adjustments to likelihood?

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    0bce5cf View commit details
    Browse the repository at this point in the history

  9. added unit test

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    21aa09c View commit details
    Browse the repository at this point in the history

  10. updated documentation to pass R CMD check

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    a263fcc View commit details
    Browse the repository at this point in the history

  11. added ranef unit test for gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    999eb6b View commit details
    Browse the repository at this point in the history

  12. more testing of gpcount

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    457b584 View commit details
    Browse the repository at this point in the history

  13. bracket methods need work

    @rbchan
    rbchan committed Sep 25, 2012
    Configuration menu
    Copy the full SHA
    0acc46c View commit details
    Browse the repository at this point in the history

Commits on Sep 26, 2012

  1. nonparboot still doesn't work for pcountOpen

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    b173294 View commit details
    Browse the repository at this point in the history

  2. testing bracket subset methods

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    d6842ed View commit details
    Browse the repository at this point in the history

  3. changed bsType to 'site' for pcount. Also applies to pcountOpen

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    af738d5 View commit details
    Browse the repository at this point in the history

  4. added note to nonparboot help file

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    5175b20 View commit details
    Browse the repository at this point in the history

  5. fixed getP method for gdistsamp(..., 'uniform'). This fixes problem w… 

    …ith ranef
    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    0fd0aa5 View commit details
    Browse the repository at this point in the history

  6. changed method of computing model-averaged CIs

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    5b4e2da View commit details
    Browse the repository at this point in the history

  7. trying to avoid warnings in R CMD check

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    73f25e3 View commit details
    Browse the repository at this point in the history

  8. upped version number. Passes R CMD check

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    5ebe51b View commit details
    Browse the repository at this point in the history

  9. cleaned up the dependent double observer example in sim.gmultmix

    @rbchan
    rbchan committed Sep 26, 2012
    Configuration menu
    Copy the full SHA
    dd4c24d View commit details
    Browse the repository at this point in the history

Commits on Oct 3, 2012

  1. Dave's changes

    @rbchan
    rbchan committed Oct 3, 2012
    Configuration menu
    Copy the full SHA
    4a4de73 View commit details
    Browse the repository at this point in the history

  2. merged master

    @rbchan
    rbchan committed Oct 3, 2012
    Configuration menu
    Copy the full SHA
    d9628dd View commit details
    Browse the repository at this point in the history

Commits on Oct 4, 2012

  1. moved colextFP stuff to new branch

    @rbchan
    rbchan committed Oct 4, 2012
    Configuration menu
    Copy the full SHA
    44b64fd View commit details
    Browse the repository at this point in the history

  2. almost passes checks

    @rbchan
    rbchan committed Oct 4, 2012
    Configuration menu
    Copy the full SHA
    827f80e View commit details
    Browse the repository at this point in the history

  3. changind line endings for src/Makevars

    @rbchan
    rbchan committed Oct 4, 2012
    Configuration menu
    Copy the full SHA
    7b7f421 View commit details
    Browse the repository at this point in the history

  4. test

    unknown authored and unknown committed Oct 4, 2012
    Configuration menu
    Copy the full SHA
    82bc74d View commit details
    Browse the repository at this point in the history

Commits on Oct 9, 2012

  1. added help files

    damiller78 committed Oct 9, 2012
    Configuration menu
    Copy the full SHA
    3892d92 View commit details
    Browse the repository at this point in the history

Commits on Oct 10, 2012

  1. new stuff

    damiller78 committed Oct 10, 2012
    Configuration menu
    Copy the full SHA
    113c6aa View commit details
    Browse the repository at this point in the history

  2. Merge branch 'occuFP'

    @rbchan
    rbchan committed Oct 10, 2012
    Configuration menu
    Copy the full SHA
    7da00d8 View commit details
    Browse the repository at this point in the history

  3. Added Dave as unmarked author. Updated docs

    @rbchan
    rbchan committed Oct 10, 2012
    Configuration menu
    Copy the full SHA
    b702cdd View commit details
    Browse the repository at this point in the history

  4. last commit before release of 0.9-9?

    @rbchan
    rbchan committed Oct 10, 2012
    Configuration menu
    Copy the full SHA
    06c87b7 View commit details
    Browse the repository at this point in the history

  5. commented-out some code in examples at request of CRAN

    @rbchan
    rbchan committed Oct 10, 2012
    Configuration menu
    Copy the full SHA
    c7722db View commit details
    Browse the repository at this point in the history

Commits on Oct 15, 2012

  1. trying to avoid segfault in C++ likelihood for distsamp

    @rbchan
    rbchan committed Oct 15, 2012
    Configuration menu
    Copy the full SHA
    2c120ea View commit details
    Browse the repository at this point in the history

Commits on Oct 16, 2012

  1. avoiding numerical integration in nll_distsamp

    @rbchan
    rbchan committed Oct 16, 2012
    Configuration menu
    Copy the full SHA
    f7529c6 View commit details
    Browse the repository at this point in the history

Commits on Oct 17, 2012

  1. added analytical integration for negexp det fun for line transects

    @rbchan
    rbchan committed Oct 17, 2012
    Configuration menu
    Copy the full SHA
    a3b2312 View commit details
    Browse the repository at this point in the history

Commits on Nov 20, 2012

  1. fixed NA problem in occuFP

    damiller78 committed Nov 20, 2012
    Configuration menu
    Copy the full SHA
    31e1f4b View commit details
    Browse the repository at this point in the history

Commits on Nov 21, 2012

  1. Merge branch 'master' into occuFP

    @rbchan
    rbchan committed Nov 21, 2012
    Configuration menu
    Copy the full SHA
    6cda927 View commit details
    Browse the repository at this point in the history

Commits on Nov 27, 2012

  1. another NA fix for occuFP

    David Miller committed Nov 27, 2012
    Configuration menu
    Copy the full SHA
    9a6a4f0 View commit details
    Browse the repository at this point in the history

Commits on Apr 5, 2013

  1. fixed integration settings that were causing segfault on some platforms

    @rbchan
    rbchan committed Apr 5, 2013
    Configuration menu
    Copy the full SHA
    b6a0ebe View commit details
    Browse the repository at this point in the history

Commits on Apr 15, 2013

  1. preparing for new release

    @rbchan
    rbchan committed Apr 15, 2013
    Configuration menu
    Copy the full SHA
    42efc3c View commit details
    Browse the repository at this point in the history

  2. analytical integration of neg exp detfun

    @rbchan
    rbchan committed Apr 15, 2013
    Configuration menu
    Copy the full SHA
    a305a64 View commit details
    Browse the repository at this point in the history

  3. tinkering with gdistsamp

    @rbchan
    rbchan committed Apr 15, 2013
    Configuration menu
    Copy the full SHA
    a7c3a59 View commit details
    Browse the repository at this point in the history

Commits on Apr 16, 2013

  1. passed R CMD check

    @rbchan
    rbchan committed Apr 16, 2013
    Configuration menu
    Copy the full SHA
    a5c8634 View commit details
    Browse the repository at this point in the history

  2. replaced raster:::layerNames() with raster:::names()

    @rbchan
    rbchan committed Apr 16, 2013
    Configuration menu
    Copy the full SHA
    173dab5 View commit details
    Browse the repository at this point in the history

  3. cleaned up a few EB examples

    @rbchan
    rbchan committed Apr 16, 2013
    Configuration menu
    Copy the full SHA
    c43ee8f View commit details
    Browse the repository at this point in the history

  4. version 0.10-0

    @rbchan
    rbchan committed Apr 16, 2013
    Configuration menu
    Copy the full SHA
    866e868 View commit details
    Browse the repository at this point in the history

  5. edited examples to decrease execution time

    @rbchan
    rbchan committed Apr 16, 2013
    Configuration menu
    Copy the full SHA
    a133227 View commit details
    Browse the repository at this point in the history

Commits on May 7, 2013

  1. changed 'occupancy' to 'abundance' in occuRN help page. Thanks to Mar… 

    …c Kery
    @rbchan
    rbchan committed May 7, 2013
    Configuration menu
    Copy the full SHA
    4380f79 View commit details
    Browse the repository at this point in the history

Commits on Jun 7, 2013

  1. removed CFLAGS

    @rbchan
    rbchan committed Jun 7, 2013
    Configuration menu
    Copy the full SHA
    8053e0e View commit details
    Browse the repository at this point in the history

  2. removed UTF-8 encoding

    @rbchan
    rbchan committed Jun 7, 2013
    Configuration menu
    Copy the full SHA
    42b481f View commit details
    Browse the repository at this point in the history

Commits on Jun 10, 2013

  1. doc fixes

    @rbchan
    rbchan committed Jun 10, 2013
    Configuration menu
    Copy the full SHA
    3f0e2e1 View commit details
    Browse the repository at this point in the history

Commits on Jun 12, 2013

  1. man

    @rbchan
    rbchan committed Jun 12, 2013
    Configuration menu
    Copy the full SHA
    2bbde10 View commit details
    Browse the repository at this point in the history

Commits on Aug 6, 2013

  1. Merge branch 'occuFP' of github.com:damiller78/unmarked into occuFP

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    7afcf7d View commit details
    Browse the repository at this point in the history

  2. Merge branch 'occuFP'

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    dc3bc10 View commit details
    Browse the repository at this point in the history

  3. Dirk's patch

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    caf8706 View commit details
    Browse the repository at this point in the history

  4. new email address. new release

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    449e8e7 View commit details
    Browse the repository at this point in the history

  5. new email

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    63215f6 View commit details
    Browse the repository at this point in the history

  6. making CRAN happy

    @rbchan
    rbchan committed Aug 6, 2013
    Configuration menu
    Copy the full SHA
    3cbd9f8 View commit details
    Browse the repository at this point in the history

Commits on Jan 8, 2014

  1. RcppArmadillo removed from Depends

    @rbchan
    rbchan committed Jan 8, 2014
    Configuration menu
    Copy the full SHA
    5f97c73 View commit details
    Browse the repository at this point in the history

Commits on Jan 10, 2014

  1. CRAN

    @rbchan
    rbchan committed Jan 10, 2014
    Configuration menu
    Copy the full SHA
    63a2aab View commit details
    Browse the repository at this point in the history

Commits on Jan 13, 2014

  1. fixed bug in fitted method for pcount ZIP

    @rbchan
    rbchan committed Jan 13, 2014
    Configuration menu
    Copy the full SHA
    ee69cf2 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' of https://github.com/rbchan/unmarked

    @rbchan
    rbchan committed Jan 13, 2014
    Configuration menu
    Copy the full SHA
    80f5b93 View commit details
    Browse the repository at this point in the history

  3. DESCRIPTION

    @rbchan
    rbchan committed Jan 13, 2014
    Configuration menu
    Copy the full SHA
    9f51bd6 View commit details
    Browse the repository at this point in the history

  4. back to CRAN

    @rbchan
    rbchan committed Jan 13, 2014
    Configuration menu
    Copy the full SHA
    f50512b View commit details
    Browse the repository at this point in the history

Commits on Apr 28, 2014

  1. dealing with plyr

    @rbchan
    rbchan committed Apr 28, 2014
    Configuration menu
    Copy the full SHA
    36e795c View commit details
    Browse the repository at this point in the history

  2. submited v0-10.4 to CRAN

    @rbchan
    rbchan committed Apr 28, 2014
    Configuration menu
    Copy the full SHA
    8887680 View commit details
    Browse the repository at this point in the history

Commits on May 23, 2014

  1. MHB data

    @jaroyle
    jaroyle committed May 23, 2014
    Configuration menu
    Copy the full SHA
    e6581f6 View commit details
    Browse the repository at this point in the history

Commits on Nov 21, 2014

  1. old updates to Gompertz function committing now

    @falafelbot
    falafelbot committed Nov 21, 2014
    Configuration menu
    Copy the full SHA
    b37f495 View commit details
    Browse the repository at this point in the history

Commits on Dec 15, 2014

  1. Added penalized likelihood methods. Main new code is in occuPEN.R. Ex… 

    …amples, documentation, and unit tests for new methods have also been added, and this build passes the CRAN checks.
    @rebecca-hutchinson
    rebecca-hutchinson committed Dec 15, 2014
    Configuration menu
    Copy the full SHA
    3a2aec2 View commit details
    Browse the repository at this point in the history

Commits on Dec 17, 2014

  1. Updated default lambdaVec for cross-validation; updated cross-validat… 

    …ion example
    @rebecca-hutchinson
    rebecca-hutchinson committed Dec 17, 2014
    Configuration menu
    Copy the full SHA
    f532e5a View commit details
    Browse the repository at this point in the history

Commits on Jan 3, 2015

  1. Reupdated sim.pcountOpen

    @falafelbot
    falafelbot committed Jan 3, 2015
    Configuration menu
    Copy the full SHA
    1987aca View commit details
    Browse the repository at this point in the history

  2. Applied colvec to mat fixes

    @falafelbot
    falafelbot committed Jan 3, 2015
    Configuration menu
    Copy the full SHA
    c5937ac View commit details
    Browse the repository at this point in the history

  3. Applied colvec to mat fixes

    @falafelbot
    falafelbot committed Jan 3, 2015
    Configuration menu
    Copy the full SHA
    42b78a5 View commit details
    Browse the repository at this point in the history

  4. Applied colvec to mat fixes

    @falafelbot
    falafelbot committed Jan 3, 2015
    Configuration menu
    Copy the full SHA
    a4fe819 View commit details
    Browse the repository at this point in the history

Commits on Jan 13, 2015

  1. Reupdated sim.pcountOpen

    @falafelbot
    falafelbot committed Jan 13, 2015
    Configuration menu
    Copy the full SHA
    3c56db4 View commit details
    Browse the repository at this point in the history

  2. Merging

    @falafelbot
    falafelbot committed Jan 13, 2015
    Configuration menu
    Copy the full SHA
    2ad4709 View commit details
    Browse the repository at this point in the history

  3. fewer sims in sim.pcountOpen

    @falafelbot
    falafelbot committed Jan 13, 2015
    Configuration menu
    Copy the full SHA
    f84b39e View commit details
    Browse the repository at this point in the history

  4. updated help

    @falafelbot
    falafelbot committed Jan 13, 2015
    Configuration menu
    Copy the full SHA
    c1d12b0 View commit details
    Browse the repository at this point in the history

Commits on Jan 15, 2015

  1. merged Jeff's changes

    @rbchan
    rbchan committed Jan 15, 2015
    Configuration menu
    Copy the full SHA
    2bf1983 View commit details
    Browse the repository at this point in the history

Commits on Jan 22, 2015

  1. fixing notrend omissions

    @falafelbot
    falafelbot committed Jan 22, 2015
    Configuration menu
    Copy the full SHA
    c8cf27a View commit details
    Browse the repository at this point in the history

  2. preparing for release of 10-5

    @rbchan
    rbchan committed Jan 22, 2015
    Configuration menu
    Copy the full SHA
    f661e05 View commit details
    Browse the repository at this point in the history

  3. help page for unmarkedMultFrame

    @rbchan
    rbchan committed Jan 22, 2015
    Configuration menu
    Copy the full SHA
    2ae98b8 View commit details
    Browse the repository at this point in the history

Commits on Jan 23, 2015

  1. submitted 0-10.5 to CRAN

    @rbchan
    rbchan committed Jan 23, 2015
    Configuration menu
    Copy the full SHA
    fdd7411 View commit details
    Browse the repository at this point in the history

  2. fixing log of integer

    @falafelbot
    falafelbot committed Jan 23, 2015
    Configuration menu
    Copy the full SHA
    53d6958 View commit details
    Browse the repository at this point in the history

  3. Merge branch 'gompertz2' of https://github.com/falafelbot/unmarked in… 

    …to gompertz2
    @rbchan
    rbchan committed Jan 23, 2015
    Configuration menu
    Copy the full SHA
    1819be0 View commit details
    Browse the repository at this point in the history

Commits on Jan 26, 2015

  1. removed GNU make requirement

    @rbchan
    rbchan committed Jan 26, 2015
    Configuration menu
    Copy the full SHA
    12de82d View commit details
    Browse the repository at this point in the history

  2. correcting 0.10-5

    @rbchan
    rbchan committed Jan 26, 2015
    Configuration menu
    Copy the full SHA
    d5c31b2 View commit details
    Browse the repository at this point in the history

Commits on Jan 27, 2015

  1. bump version number

    @rbchan
    rbchan committed Jan 27, 2015
    Configuration menu
    Copy the full SHA
    f7e99a0 View commit details
    Browse the repository at this point in the history

Commits on Jan 29, 2015

  1. I think I must have edited something

    @jaroyle
    jaroyle committed Jan 29, 2015
    Configuration menu
    Copy the full SHA
    dec8482 View commit details
    Browse the repository at this point in the history

  2. MHB jay data, update Switzerland data, fix ufp variable name

    @jaroyle
    jaroyle committed Jan 29, 2015
    Configuration menu
    Copy the full SHA
    7e75835 View commit details
    Browse the repository at this point in the history

Commits on Feb 3, 2015

  1. Merge branch 'master' of github.com:rbchan/unmarked

    @jaroyle
    jaroyle committed Feb 3, 2015
    Configuration menu
    Copy the full SHA
    f4186ec View commit details
    Browse the repository at this point in the history

Commits on Mar 16, 2015

  1. Added unit tests, citations.

    @rebecca-hutchinson
    rebecca-hutchinson committed Mar 16, 2015
    Configuration menu
    Copy the full SHA
    28b4098 View commit details
    Browse the repository at this point in the history

Commits on Apr 19, 2015

  1. Fixing ranef to work with new pcountOpen dynamics

    @falafelbot
    falafelbot committed Apr 19, 2015
    Configuration menu
    Copy the full SHA
    b56bec5 View commit details
    Browse the repository at this point in the history

Commits on May 29, 2015

  1. added a line to gmultmix to accommodate multiple protocol piFuns

    @jaroyle
    jaroyle committed May 29, 2015
    Configuration menu
    Copy the full SHA
    1b447cc View commit details
    Browse the repository at this point in the history

Commits on May 31, 2015

  1. simulate for gmultmix was edited to be consistent with gmultmix

    @jaroyle
    jaroyle committed May 31, 2015
    Configuration menu
    Copy the full SHA
    cf97c73 View commit details
    Browse the repository at this point in the history

Commits on Jun 1, 2015

  1. typo

    @jaroyle
    jaroyle committed Jun 1, 2015
    Configuration menu
    Copy the full SHA
    1e504e1 View commit details
    Browse the repository at this point in the history

Commits on Aug 11, 2015

  1. update DESC

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    c862ea1 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'occuPEN' of https://github.com/rebecca-hutchinson/unmarked 

     into occuPEN
    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    a855a92 View commit details
    Browse the repository at this point in the history

  3. desc

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    ac43576 View commit details
    Browse the repository at this point in the history

  4. changed some ufp to ufc

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    f8cda89 View commit details
    Browse the repository at this point in the history

  5. occuPen edits

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    c536afb View commit details
    Browse the repository at this point in the history

  6. fixing errors noticed by R CMD check

    @rbchan
    rbchan committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    9e9d8f2 View commit details
    Browse the repository at this point in the history

  7. minor edits

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    97fbca5 View commit details
    Browse the repository at this point in the history

  8. Merge branch 'master' of github.com:rbchan/unmarked

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    5779f9d View commit details
    Browse the repository at this point in the history

  9. removed constraint in pcountOpen that lambdaformula==omegaformula

    @rbchan
    rbchan committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    79dcab7 View commit details
    Browse the repository at this point in the history

  10. Merge branch 'master' of https://github.com/rbchan/unmarked

    @rbchan
    rbchan committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    153331f View commit details
    Browse the repository at this point in the history

  11. Bump version number

    @rbchan
    rbchan committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    09990ac View commit details
    Browse the repository at this point in the history

  12. major bug fix gdistsamp == initialized mn to 0 not -Inf

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    a00a522 View commit details
    Browse the repository at this point in the history

  13. Merge branch 'master' of github.com:rbchan/unmarked

    @jaroyle
    jaroyle committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    a9cd1db View commit details
    Browse the repository at this point in the history

  14. NEWS

    @rbchan
    rbchan committed Aug 11, 2015
    Configuration menu
    Copy the full SHA
    3d1e27f View commit details
    Browse the repository at this point in the history

Commits on Aug 14, 2015

  1. making bindings visible

    @rbchan
    rbchan committed Aug 14, 2015
    Configuration menu
    Copy the full SHA
    9f82703 View commit details
    Browse the repository at this point in the history

  2. Jeff's bug fixes to ranef

    @rbchan
    rbchan committed Aug 14, 2015
    Configuration menu
    Copy the full SHA
    f547e8d View commit details
    Browse the repository at this point in the history

  3. fixed bug in pcountOpen when covariates were time-varying but not var… 

    …ying among sites
    @rbchan
    rbchan committed Aug 14, 2015
    Configuration menu
    Copy the full SHA
    0282b7e View commit details
    Browse the repository at this point in the history

  4. fixed bug in pcountOpen when covariates were time-varying but not var… 

    …ying among sites
    @rbchan
    rbchan committed Aug 14, 2015
    Configuration menu
    Copy the full SHA
    d5442b0 View commit details
    Browse the repository at this point in the history

Commits on Aug 17, 2015

  1. fixed error in pcountOpen likelihood for immigration models with cova… 

    …riates
    @rbchan
    rbchan committed Aug 17, 2015
    Configuration menu
    Copy the full SHA
    373fe77 View commit details
    Browse the repository at this point in the history

Commits on Aug 18, 2015

  1. added one more blurb to news

    @jaroyle
    jaroyle committed Aug 18, 2015
    Configuration menu
    Copy the full SHA
    202a226 View commit details
    Browse the repository at this point in the history

  2. edited the NAMESPACE file as per Hornik's email

    @jaroyle
    jaroyle committed Aug 18, 2015
    Configuration menu
    Copy the full SHA
    95c4b39 View commit details
    Browse the repository at this point in the history

  3. fixing imports and invisible bindings

    @rbchan
    rbchan committed Aug 18, 2015
    Configuration menu
    Copy the full SHA
    3926d03 View commit details
    Browse the repository at this point in the history

Commits on Aug 26, 2015

  1. removed the last invisible binding

    @rbchan
    rbchan committed Aug 26, 2015
    Configuration menu
    Copy the full SHA
    e9d962d View commit details
    Browse the repository at this point in the history

Commits on Sep 29, 2015

  1. edited help file for cruz to reflect elev is FEET

    @jaroyle
    jaroyle committed Sep 29, 2015
    Configuration menu
    Copy the full SHA
    0d07c9f View commit details
    Browse the repository at this point in the history

Commits on Nov 13, 2015

  1. Add parallel computation option to parboot

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    8b9b64b View commit details
    Browse the repository at this point in the history

  2. Update parboot documentation

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    d3b6180 View commit details
    Browse the repository at this point in the history

  3. Import parallel package

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    4c8ce6b View commit details
    Browse the repository at this point in the history

  4. Add parallel package to dependencies

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    4ef6631 View commit details
    Browse the repository at this point in the history

  5. Fix tabulation

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    2d12183 View commit details
    Browse the repository at this point in the history

  6. Add unit test for parboot (unmarkedFitOccu)

    @adamdsmith
    adamdsmith committed Nov 13, 2015
    Configuration menu
    Copy the full SHA
    3300019 View commit details
    Browse the repository at this point in the history

Commits on Nov 18, 2015

  1. formatMult no longer corrupts covariates when factors are present; fixes 

     #47
    @adamdsmith
    adamdsmith committed Nov 18, 2015
    Configuration menu
    Copy the full SHA
    3f9f1b5 View commit details
    Browse the repository at this point in the history

  2. add unit test for formatMult

    @adamdsmith
    adamdsmith committed Nov 18, 2015
    Configuration menu
    Copy the full SHA
    3788ef5 View commit details
    Browse the repository at this point in the history

Commits on Dec 16, 2015

  1. edit description

    @jaroyle
    jaroyle committed Dec 16, 2015
    Configuration menu
    Copy the full SHA
    6c8e6db View commit details
    Browse the repository at this point in the history

Commits on Dec 22, 2015

  1. removed duplicate tp1 definitions

    @rbchan
    rbchan committed Dec 22, 2015
    Configuration menu
    Copy the full SHA
    abe78f3 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' of https://github.com/rbchan/unmarked

    @rbchan
    rbchan committed Dec 22, 2015
    Configuration menu
    Copy the full SHA
    574c284 View commit details
    Browse the repository at this point in the history

Commits on Jan 15, 2016

  1. Merge pull request #1 from rbchan/master 

    Update from original
    @adamdsmith
    adamdsmith committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    695961f View commit details
    Browse the repository at this point in the history

  2. fix failure of formatMult to drop siteCovs and yearlySiteCovs from ob… 

    …sCovs in creation of unmarkedMultFrame; update unit test
    @adamdsmith
    adamdsmith committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    a910b90 View commit details
    Browse the repository at this point in the history

  3. Merge pull request #89 from adamdsmith/master 

    fix failure of formatMult to drop siteCovs and yearlySiteCovs from obsCovs
    @rbchan
    rbchan committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    e8d248d View commit details
    Browse the repository at this point in the history

  4. Actually incorporate filtered obsCovs into final unmarkedMultFrame

    @adamdsmith
    adamdsmith committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    0dcfeaa View commit details
    Browse the repository at this point in the history

  5. Merge remote-tracking branch 'upstream/master'

    @adamdsmith
    adamdsmith committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    75b0b2a View commit details
    Browse the repository at this point in the history

  6. Merge pull request #90 from adamdsmith/master 

    Incorporate filtered obsCovs into final unmarkedMultFrame
    @rbchan
    rbchan committed Jan 15, 2016
    Configuration menu
    Copy the full SHA
    47d03ef View commit details
    Browse the repository at this point in the history

Commits on Feb 16, 2016

  1. new formatDistData which puts in NAs 

    I took a stab at altering the source code today to remedy the NA problem. 

This requires an additional input (an effort matrix of 1's for surveys and 0's for no surveys) but it does the job.
    @aurielfournier
    aurielfournier committed Feb 16, 2016
    Configuration menu
    Copy the full SHA
    5ecfcfa View commit details
    Browse the repository at this point in the history

  2. Merge pull request #93 from aurielfournier/patch-1 

    new formatDistData which puts in NAs
    @jaroyle
    jaroyle committed Feb 16, 2016
    Configuration menu
    Copy the full SHA
    0bb003e View commit details
    Browse the repository at this point in the history

Commits on Feb 17, 2016

  1. including effortMatrix in formatDistData documentation

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    068e768 View commit details
    Browse the repository at this point in the history

  2. Merge remote-tracking branch 'upstream/master' 

    merge with upstream
    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    9598490 View commit details
    Browse the repository at this point in the history

  3. effortMatrix now not req for formaatDistData

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    047fe53 View commit details
    Browse the repository at this point in the history

  4. added a check for non numeric effortMatrix

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    ff76759 View commit details
    Browse the repository at this point in the history

  5. added in check for num in effortMatrix

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    18818e1 View commit details
    Browse the repository at this point in the history

  6. added two tests for effortMatrix, all pass

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    b5fa61d View commit details
    Browse the repository at this point in the history

  7. rm formatDistData.R replace in utils.R

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    0cbd821 View commit details
    Browse the repository at this point in the history

  8. moving down the bracket

    @aurielfournier
    aurielfournier committed Feb 17, 2016
    Configuration menu
    Copy the full SHA
    8140844 View commit details
    Browse the repository at this point in the history

Commits on Feb 26, 2016

  1. fixed obsToY issue for custom pi function

    @jaroyle
    jaroyle committed Feb 26, 2016
    Configuration menu
    Copy the full SHA
    9f77124 View commit details
    Browse the repository at this point in the history

Commits on Jun 1, 2016

  1. one edit to unmarkedFramePCount help

    @jaroyle
    jaroyle committed Jun 1, 2016
    Configuration menu
    Copy the full SHA
    3e433c8 View commit details
    Browse the repository at this point in the history

Commits on Aug 5, 2016

  1. Fix formatMult conversion of julian date/visit to factor

    @adamdsmith
    adamdsmith committed Aug 5, 2016
    Configuration menu
    Copy the full SHA
    cb27fff View commit details
    Browse the repository at this point in the history

Commits on Aug 10, 2016

  1. Merge pull request #100 from adamdsmith/master 

    Fix formatMult conversion of julian date/visit to factor
    @jaroyle
    jaroyle authored Aug 10, 2016
    Configuration menu
    Copy the full SHA
    571328a View commit details
    Browse the repository at this point in the history

Commits on Aug 16, 2016

  1. Fixed mistake in turnover calculations in colext vignette

    @rbchan
    rbchan committed Aug 16, 2016
    Configuration menu
    Copy the full SHA
    422b109 View commit details
    Browse the repository at this point in the history

  2. added new NEWS line for upcoming release

    @rbchan
    rbchan committed Aug 16, 2016
    Configuration menu
    Copy the full SHA
    4683476 View commit details
    Browse the repository at this point in the history

Commits on Nov 11, 2016

  1. Changed default value of 'K' in fitted() methods

    @rbchan
    rbchan committed Nov 11, 2016
    Configuration menu
    Copy the full SHA
    f1e9917 View commit details
    Browse the repository at this point in the history

Commits on Dec 17, 2016

  1. edited warning message on 'sites removed'

    @jaroyle
    jaroyle committed Dec 17, 2016
    Configuration menu
    Copy the full SHA
    f631b0e View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' of github.com:rbchan/unmarked

    @jaroyle
    jaroyle committed Dec 17, 2016
    Configuration menu
    Copy the full SHA
    056aef9 View commit details
    Browse the repository at this point in the history

Commits on Mar 8, 2017

  1. added pcount.spHDS from AHM book , updated predict method for pcount … 

    …ZIP model, documentation
    @jaroyle
    jaroyle committed Mar 8, 2017
    Configuration menu
    Copy the full SHA
    32028ff View commit details
    Browse the repository at this point in the history

Commits on Apr 15, 2017

  1. v 0.12 work

    @jaroyle
    jaroyle committed Apr 15, 2017
    Configuration menu
    Copy the full SHA
    da412e4 View commit details
    Browse the repository at this point in the history

  2. update

    @jaroyle
    jaroyle committed Apr 15, 2017
    Configuration menu
    Copy the full SHA
    82458a6 View commit details
    Browse the repository at this point in the history

Commits on Apr 16, 2017

  1. fixed one error in formatdistdata

    @jaroyle
    jaroyle committed Apr 16, 2017
    Configuration menu
    Copy the full SHA
    c00b7d9 View commit details
    Browse the repository at this point in the history

  2. Fixes for --as-cran checks

    Mike Meredith committed Apr 16, 2017
    Configuration menu
    Copy the full SHA
    2f3759c View commit details
    Browse the repository at this point in the history

  3. Merge pull request #104 from mikemeredith/master 

    Fixes for --as-cran checks
    @jaroyle
    jaroyle authored Apr 16, 2017
    Configuration menu
    Copy the full SHA
    51f575e View commit details
    Browse the repository at this point in the history

Commits on Apr 17, 2017

  1. Bump version to 0.12.1 as 0.12.0 now on CRAN

    Mike Meredith committed Apr 17, 2017
    Configuration menu
    Copy the full SHA
    ac58a80 View commit details
    Browse the repository at this point in the history

  2. Data files recompressed, smaller

    Mike Meredith committed Apr 17, 2017
    Configuration menu
    Copy the full SHA
    8bf78a8 View commit details
    Browse the repository at this point in the history

Commits on Apr 26, 2017

  1. Merge pull request #105 from rbchan/recompressData 

    Data files recompressed, smaller
    mikemeredith authored Apr 26, 2017
    Configuration menu
    Copy the full SHA
    51eebb0 View commit details
    Browse the repository at this point in the history

Commits on May 2, 2017

  1. fixes to pcount.spHDS stuff

    @jaroyle
    jaroyle committed May 2, 2017
    Configuration menu
    Copy the full SHA
    707dc65 View commit details
    Browse the repository at this point in the history

Commits on May 4, 2017

  1. Tweaks + example 

    Tweaks to pcount.spHDS to deal with R CMD check NOTEs; expanded
description and added example to help file.
    Mike Meredith committed May 4, 2017
    Configuration menu
    Copy the full SHA
    db92c61 View commit details
    Browse the repository at this point in the history