Homebrew-science

These formulae provide software tailored to scientific endeavors. Need to store large amounts of data in a sparse matrix, solve a huge optimization problem or process the images from your space telescope? Maybe we can help!

How do I install these formulae?

Just brew tap homebrew/science and then brew install <formula>.

If the formula conflicts with one from mxcl/master or another tap, you can brew install homebrew/science/<formula>.

You can also install via URL:

brew install https://raw.github.com/Homebrew/homebrew-science/master/<formula>.rb

Docs

brew help, man brew, or the Homebrew wiki.

Name		Name	Last commit message	Last commit date
Latest commit History 637 Commits
README.md		README.md
abyss.rb		abyss.rb
adol-c.rb		adol-c.rb
amos.rb		amos.rb
analysis.rb		analysis.rb
ann.rb		ann.rb
armadillo.rb		armadillo.rb
arow++.rb		arow++.rb
bact.rb		bact.rb
bali-phy.rb		bali-phy.rb
bam-readcount.rb		bam-readcount.rb
bamtools.rb		bamtools.rb
bamutil.rb		bamutil.rb
beagle.rb		beagle.rb
bedops.rb		bedops.rb
bedtools.rb		bedtools.rb
bioawk.rb		bioawk.rb
bitseq.rb		bitseq.rb
blast.rb		blast.rb
blat.rb		blat.rb
bowtie.rb		bowtie.rb
bowtie2.rb		bowtie2.rb
bwa.rb		bwa.rb
cd-hit.rb		cd-hit.rb
cddlib.rb		cddlib.rb
cgns.rb		cgns.rb
clustal-omega.rb		clustal-omega.rb
clustal-w.rb		clustal-w.rb
cminpack.rb		cminpack.rb
coinmp.rb		coinmp.rb
coinutils.rb		coinutils.rb
colpack.rb		colpack.rb
cufflinks.rb		cufflinks.rb
dadadodo.rb		dadadodo.rb
dssp.rb		dssp.rb
edena.rb		edena.rb
elph.rb		elph.rb
emboss.rb		emboss.rb
fann.rb		fann.rb
fast-statistical-alignment.rb		fast-statistical-alignment.rb
fastqc.rb		fastqc.rb
fasttree.rb		fasttree.rb
fastx_toolkit.rb		fastx_toolkit.rb
fermi.rb		fermi.rb
flann.rb		flann.rb
galib.rb		galib.rb
gfan.rb		gfan.rb
glimmer3.rb		glimmer3.rb
glpk.rb		glpk.rb
gmap-gsnap.rb		gmap-gsnap.rb
hmmer.rb		hmmer.rb
hopdm.rb		hopdm.rb
hyphy.rb		hyphy.rb
igraph.rb		igraph.rb
infernal.rb		infernal.rb
insighttoolkit.rb		insighttoolkit.rb
jellyfish.rb		jellyfish.rb
kalign.rb		kalign.rb
kmergenie.rb		kmergenie.rb
lammps.rb		lammps.rb
lastz.rb		lastz.rb
libsequence.rb		libsequence.rb
lp_solve.rb		lp_solve.rb
mafft.rb		mafft.rb
mallet.rb		mallet.rb
mathgl.rb		mathgl.rb
mathomatic.rb		mathomatic.rb
maxima.rb		maxima.rb
mcl.rb		mcl.rb
meme.rb		meme.rb
metis.rb		metis.rb
metis4.rb		metis4.rb
mira.rb		mira.rb
mpsolve.rb		mpsolve.rb
mrbayes.rb		mrbayes.rb
mrfast.rb		mrfast.rb
mummer.rb		mummer.rb
muscle.rb		muscle.rb
nauty.rb		nauty.rb
nco.rb		nco.rb
niftilib.rb		niftilib.rb
octave.rb		octave.rb
openblas.rb		openblas.rb
opencv.rb		opencv.rb
openimageio.rb		openimageio.rb
paml.rb		paml.rb
parmetis.rb		parmetis.rb
perf.rb		perf.rb
petsc.rb		petsc.rb
phylip.rb		phylip.rb
phyml.rb		phyml.rb
picard-tools.rb		picard-tools.rb
plink.rb		plink.rb
pmw.rb		pmw.rb
populations.rb		populations.rb
prank.rb		prank.rb
primer3.rb		primer3.rb
prodigal.rb		prodigal.rb
pymol.rb		pymol.rb
qgis.rb		qgis.rb

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