This repo contains cleaned code used to:
- Generate estimates of routine first-dose diphtheria-tetanus-pertussis-containing-vaccine (DTP1) coverage.
- Assess the potential for integrated health service delivery opportunities by analysing the degree of overlap in prevalence of children who have never received a dose of DTP (no-DTP) with other important health indicators in select countries.
This code was used in producing the analyses described in the following citation:
Haeuser, E.; Nguyen, J.Q.; Rolfe, S.; Nesbit, O.; Fullman, N.; Mosser, J.F. Assessing Geographic Overlap between Zero-Dose Diphtheria–Tetanus–Pertussis Vaccination Prevalence and Other Health Indicators. Vaccines 2023, 11, 802. https://doi.org/10.3390/vaccines11040802
This repo contains three directories:
- lbd_core contains general code for model based geostatistics used across Local Burden of Disease projects at IHME.
- vaccine contains code that is specific to data processing and estimating vaccination coverage.
- vaccines contains wrapper scripts, supporting data and code for the overlap analyses.
The paper can be found here: https://doi.org/10.3390/vaccines11040802. The Global Health Data Exchange (GHDx) record, with tabular estimates and secondary analytical results, can be found here: http://ghdx.healthdata.org/record/ihme-data/dtp-vaccines-zerodose-overlap.