Merge pull request #2710 from btbest/restyle-label-table #697
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name: conda-package | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
conda-noarch-build: | |
runs-on: ubuntu-latest | |
outputs: | |
version: ${{ steps.version.outputs.version }} | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
fetch-depth: 0 | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
auto-activate-base: true | |
activate-environment: "" | |
channel-priority: strict | |
miniforge-variant: Mambaforge | |
use-mamba: true | |
- name: install xvfb/deps | |
run: | | |
sudo apt-get update | |
sudo apt-get install -yy libgl1-mesa-dev xvfb curl | |
- name: install common conda dependencies | |
run: mamba install -n base -c conda-forge mamba boa setuptools_scm -y | |
- uses: actions/cache@v2 | |
with: | |
path: | | |
pkgs/noarch | |
pkgs/channeldata.json | |
key: ${{ github.sha }}-packages | |
- id: version | |
shell: bash -l {0} | |
run: | | |
vers=$( python setup.py --version ) | |
echo "version=${vers}" >> $GITHUB_OUTPUT | |
- name: linux conda build test | |
shell: bash -l {0} | |
run: | | |
mkdir -p ./pkgs/noarch | |
conda mambabuild -c conda-forge conda-recipe --no-test --output-folder ./pkgs | |
test-conda-packages: | |
needs: [conda-noarch-build] | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [macos-latest, windows-latest, ubuntu-latest] | |
ilastik_variant: ["ilastik-core", "ilastik", "ilastik-gpu"] | |
exclude: | |
- os: macos-latest | |
ilastik_variant: "ilastik-gpu" | |
include: | |
- ilastik_variant: "ilastik-core" | |
build_prefix: "py_" | |
runs-on: ${{ matrix.os }} | |
env: | |
ILASTIK_PACKAGE_NAME: ${{ matrix.ilastik_variant }}-${{ needs.conda-noarch-build.outputs.version }}-${{ matrix.build_prefix }}0.tar.bz2 | |
steps: | |
# necessary on windows: https://github.com/actions/cache/issues/591#issuecomment-845132253 | |
- name: "Use GNU tar instead BSD tar" | |
if: matrix.os == 'windows-latest' | |
shell: cmd | |
run: echo C:\Program Files\Git\usr\bin>>"%GITHUB_PATH%" | |
- uses: al-cheb/configure-pagefile-action@v1.3 | |
with: | |
minimum-size: 12GB | |
if: | | |
matrix.os == 'windows-latest' && | |
matrix.ilastik_variant == 'ilastik-gpu' | |
- uses: actions/checkout@v2 | |
with: | |
fetch-depth: 0 | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
auto-activate-base: true | |
activate-environment: "" | |
channel-priority: strict | |
miniforge-variant: Mambaforge | |
use-mamba: true | |
- name: install xvfb/deps | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
sudo apt-get update | |
sudo apt-get install -yy mesa-utils libgl1-mesa-dev xvfb curl | |
- name: install common conda dependencies | |
run: mamba install -n base -c conda-forge boa setuptools_scm -y | |
- uses: actions/cache@v2 | |
with: | |
path: | | |
pkgs/noarch | |
pkgs/channeldata.json | |
key: ${{ github.sha }}-packages | |
- name: linux test | |
if: matrix.os == 'ubuntu-latest' | |
shell: bash -l {0} | |
run: | | |
xvfb-run --server-args="-screen 0 1024x768x24" conda mambabuild --test --override-channels \ | |
-c ./pkgs -c conda-forge -c ilastik-forge \ | |
./pkgs/noarch/${ILASTIK_PACKAGE_NAME} | |
- name: osx test | |
if: matrix.os == 'macos-latest' | |
shell: bash -l {0} | |
run: | | |
VOLUMINA_SHOW_3D_WIDGET=0 conda mambabuild --test --override-channels \ | |
-c ./pkgs -c conda-forge -c ilastik-forge \ | |
./pkgs/noarch/${ILASTIK_PACKAGE_NAME} | |
- name: windows test | |
if: matrix.os == 'windows-latest' | |
shell: cmd /C CALL {0} | |
run: | | |
set VOLUMINA_SHOW_3D_WIDGET=0 | |
conda mambabuild --test --override-channels ^ | |
-c .\pkgs -c pytorch -c conda-forge -c ilastik-forge ^ | |
.\pkgs\noarch\%ILASTIK_PACKAGE_NAME% | |