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release 1.7.1 to sync with BioC #219

release 1.7.1 to sync with BioC

release 1.7.1 to sync with BioC #219

Workflow file for this run

---
name: Check 🛠
on:
pull_request:
types:
- opened
- synchronize
- reopened
- ready_for_review
branches:
- main
push:
branches:
- main
workflow_dispatch:
jobs:
audit:
name: Audit Dependencies 🕵️‍♂️
uses: insightsengineering/r.pkg.template/.github/workflows/audit.yaml@main
r-cmd:
name: R CMD Check 🧬
uses: insightsengineering/r.pkg.template/.github/workflows/build-check-install.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
bioccheck:
name: BiocCheck 🩺
uses: insightsengineering/r.pkg.template/.github/workflows/bioccheck.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
with:
enable-bioccheck: true
coverage:
name: Coverage 📔
uses: insightsengineering/r.pkg.template/.github/workflows/test-coverage.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
linter:
if: github.event_name != 'push'
name: SuperLinter 🦸‍♀️
uses: insightsengineering/r.pkg.template/.github/workflows/linter.yaml@main
roxygen:
name: Roxygen 🅾
uses: insightsengineering/r.pkg.template/.github/workflows/roxygen.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
with:
auto-update: true
gitleaks:
name: gitleaks 💧
uses: insightsengineering/r.pkg.template/.github/workflows/gitleaks.yaml@main
spelling:
name: Spell Check 🆎
uses: insightsengineering/r.pkg.template/.github/workflows/spelling.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
links:
if: github.event_name != 'push'
name: Check URLs 🌐
uses: insightsengineering/r.pkg.template/.github/workflows/links.yaml@main
vbump:
name: Version Bump 🤜🤛
if: github.event_name == 'push'
uses: insightsengineering/r.pkg.template/.github/workflows/version-bump.yaml@main
secrets:
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }}
version:
name: Version Check 🏁
uses: insightsengineering/r.pkg.template/.github/workflows/version.yaml@main
licenses:
name: License Check 🃏
uses: insightsengineering/r.pkg.template/.github/workflows/licenses.yaml@main
style:
if: github.event_name != 'push'
name: Style Check 👗
uses: insightsengineering/r.pkg.template/.github/workflows/style.yaml@main
with:
auto-update: true
grammar:
if: github.event_name != 'push'
name: Grammar Check 🔤
uses: insightsengineering/r.pkg.template/.github/workflows/grammar.yaml@main