iESTIMATE computational analysis framework for Eco-Metabolomics data

iESTIMATE = Identifying ESsenTIal Molecular vAriables in Terrestrial Ecology

Version: 1.1

Use-cases

The iESTIMATE framework has been developed to be applied to eco-metabolomics studies to answer a wide range of research questions. The following use-cases demonstrate the power of the framework:

• Impact of hormone treatments on the metabolome of Radula complanata
• Host Tree and Geography Induce Metabolic Shifts in the Epiphytic Liverwort Radula complanata
• Chemical Diversity and Classification of Secondary Metabolites in Nine Bryophyte Species
• Investigating untargeted metabolomics for its use in integrative taxonomy - Linking metabolomics, DNA marker-based se-quencing and bioimaging of phenotypes

History

Version 1.1:

• added some examples on variable selection to Marchantiales
• properly handle all data types now

Version 1.0:

• added Marchantiales study
• added vignettes
• added installable R package

Version 0.4:

• added riccia-chemotaxonomy study
• updated _functions.r

Version 0.3:

• added radula-environmental study

Version 0.2:

• added MTBLS709 study

Version 0.1:

• initial release