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Ivy (Shawn) Strope edited this page Sep 11, 2023 · 25 revisions

Welcome to Xenomake! A Processing pipeline for Patient Derived Xenograft (PDX) Spatial Transcriptomics Datasets

Xenomake Workflow

Publication

Xenomake: a pipeline for processing and sorting xenograft reads from spatial transcriptomic experiments
Benjamin S Strope, Katherine E Pendleton, William Z Bowie, Gloria V Echeverria, Qian Zhu
bioRxiv 2023.09.04.556109; doi: https://doi.org/10.1101/2023.09.04.556109