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replace bound on max stringency #24

Merged
merged 2 commits into from
Nov 22, 2019
Merged

replace bound on max stringency #24

merged 2 commits into from
Nov 22, 2019

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jbloom
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@jbloom jbloom commented Nov 22, 2019

In version 2.3.5, we let the max stringency parameter
go to values greater than 10. But this leads to
numerical optimization issues / overflow on real
data. So put the bound back at 10; users will
have to pre-scale very flat prefs.

In version 2.3.5, we let the max stringency parameter
go to values greater than 10. But this leads to
numerical optimization issues / overflow on real
data. So put the bound back at 10; users will
have to pre-scale very flat prefs.
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jbloom commented Nov 22, 2019

@skhilton: Sorry, undoing last pull request but we need to make it a newer version as it's not possible to take old versions off PyPI. Can you review this?

For some reason, one of the tests was seeding
initial values out of bounds.
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jbloom commented Nov 22, 2019

I have no idea why previous pull request failed: a test that wasn't even changed starting seeding initial values out of bounds for python 3.7 but not 3.6. This latest commit should fix it!

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jbloom commented Nov 22, 2019

@skhilton: I think this is now ready to review and merge?

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👍 looks good

@skhilton skhilton merged commit 0c8b59e into master Nov 22, 2019
@skhilton skhilton deleted the rebound_max_stringency branch November 22, 2019 21:39
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2 participants