Skip to content

A macOS application for microsatellite genotyping using capillary sequencing data.

License

Notifications You must be signed in to change notification settings

jeanlain/STRyper

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

45 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Platforms License DOI

STRyper

A macOS application for microsatellite genotyping and chromatogram management.

STRyper allows you to import and organise FSA/HID files generated by fragment analysis of capillary sequencers. It lets you define size standards, marker and bins for genotyping. See https://doi.org/10.32942/X2X01C.

Requirements

STRyper requires a Mac running macOS 10.13 or higher, as this OS is the development target. However, recent versions have only been tested on macOS 13 and 14.

Important

If you are using macOS 15 "Sequoia" or a more recent version, make sure to use STRyper ≥1.2.1. Any previous version will not be compatible.

Installation

Download the latest release, unzip the file an put STRyper.app anywhere you like on your Mac.

Installation from source

This is only for Xcode users. Clone the repository and open the project in Xcode. You may then build the application from Xcode.

Usage

The user guide is accessible via the application Help menu and here.

How to cite STRyper

(Reference pending)

Contributing to STRyper development

Please contact Jean Peccoud (contact information are given in https://doi.org/10.32942/X2X01C).