Kepavi

KEgg PAthway VIewer based on cytoscape.js sigmajs and some Linkurious plugins.

• Performs flux balance analysis using cobrapy and maps results onto pathways.
• Visualize whole genome based models using Biomodels.
• Visualize pathways using KEGG layout.
• 2600 available genome based models.

Why another pathway viewer ?

Because Kegg pathway viewer are complete but not very beautiful.

Alternatives

• escher

Future

Add metabolomics data processing functionalities like peaklist deisotoping, adducts/fragments annotation using mzOS