basic theme add

jillymackay · Sep 21, 2023 · 20412b1 · 20412b1
1 parent 89afaf4
commit 20412b1
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diff --git a/content/rdsvs.png b/content/rdsvs.png
diff --git a/docs/content/rdsvs.png b/docs/content/rdsvs.png
diff --git a/docs/ed_template.html b/docs/ed_template.html
@@ -10,6 +10,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles"><meta charset="utf-8">
   <meta name="generator" content="quarto-1.3.353">
 
+  <meta name="author" content="Jane Bloggs">
+  <meta name="author" content="Marie McDonald">
   <title>Customisable Edinburgh Quarto Theme - A University of Edinburgh Quarto Template</title>
   <meta name="apple-mobile-web-app-capable" content="yes">
   <meta name="apple-mobile-web-app-status-bar-style" content="black-translucent">
@@ -28,7 +30,91 @@
       margin: 0 0.8em 0.2em -1em; /* quarto-specific, see https://github.com/quarto-dev/quarto-cli/issues/4556 */ 
       vertical-align: middle;
     }
-  </style>
+    /* CSS for syntax highlighting */
+    pre > code.sourceCode { white-space: pre; position: relative; }
+    pre > code.sourceCode > span { display: inline-block; line-height: 1.25; }
+    pre > code.sourceCode > span:empty { height: 1.2em; }
+    .sourceCode { overflow: visible; }
+    code.sourceCode > span { color: inherit; text-decoration: inherit; }
+    div.sourceCode { margin: 1em 0; }
+    pre.sourceCode { margin: 0; }
+    @media screen {
+    div.sourceCode { overflow: auto; }
+    }
+    @media print {
+    pre > code.sourceCode { white-space: pre-wrap; }
+    pre > code.sourceCode > span { text-indent: -5em; padding-left: 5em; }
+    }
+    pre.numberSource code
+      { counter-reset: source-line 0; }
+    pre.numberSource code > span
+      { position: relative; left: -4em; counter-increment: source-line; }
+    pre.numberSource code > span > a:first-child::before
+      { content: counter(source-line);
+        position: relative; left: -1em; text-align: right; vertical-align: baseline;
+        border: none; display: inline-block;
+        -webkit-touch-callout: none; -webkit-user-select: none;
+        -khtml-user-select: none; -moz-user-select: none;
+        -ms-user-select: none; user-select: none;
+        padding: 0 4px; width: 4em;
+        color: #aaaaaa;
+      }
+    pre.numberSource { margin-left: 3em; border-left: 1px solid #aaaaaa;  padding-left: 4px; }
+    div.sourceCode
+      { color: #003b4f; background-color: #f1f3f5; }
+    @media screen {
+    pre > code.sourceCode > span > a:first-child::before { text-decoration: underline; }
+    }
+    code span { color: #003b4f; } /* Normal */
+    code span.al { color: #ad0000; } /* Alert */
+    code span.an { color: #5e5e5e; } /* Annotation */
+    code span.at { color: #657422; } /* Attribute */
+    code span.bn { color: #ad0000; } /* BaseN */
+    code span.bu { } /* BuiltIn */
+    code span.cf { color: #003b4f; } /* ControlFlow */
+    code span.ch { color: #20794d; } /* Char */
+    code span.cn { color: #8f5902; } /* Constant */
+    code span.co { color: #5e5e5e; } /* Comment */
+    code span.cv { color: #5e5e5e; font-style: italic; } /* CommentVar */
+    code span.do { color: #5e5e5e; font-style: italic; } /* Documentation */
+    code span.dt { color: #ad0000; } /* DataType */
+    code span.dv { color: #ad0000; } /* DecVal */
+    code span.er { color: #ad0000; } /* Error */
+    code span.ex { } /* Extension */
+    code span.fl { color: #ad0000; } /* Float */
+    code span.fu { color: #4758ab; } /* Function */
+    code span.im { color: #00769e; } /* Import */
+    code span.in { color: #5e5e5e; } /* Information */
+    code span.kw { color: #003b4f; } /* Keyword */
+    code span.op { color: #5e5e5e; } /* Operator */
+    code span.ot { color: #003b4f; } /* Other */
+    code span.pp { color: #ad0000; } /* Preprocessor */
+    code span.sc { color: #5e5e5e; } /* SpecialChar */
+    code span.ss { color: #20794d; } /* SpecialString */
+    code span.st { color: #20794d; } /* String */
+    code span.va { color: #111111; } /* Variable */
+    code span.vs { color: #20794d; } /* VerbatimString */
+    code span.wa { color: #5e5e5e; font-style: italic; } /* Warning */
+    /* CSS for citations */
+    div.csl-bib-body { }
+    div.csl-entry {
+      clear: both;
+    }
+    .hanging-indent div.csl-entry {
+      margin-left:2em;
+      text-indent:-2em;
+    }
+    div.csl-left-margin {
+      min-width:2em;
+      float:left;
+    }
+    div.csl-right-inline {
+      margin-left:2em;
+      padding-left:1em;
+    }
+    div.csl-indent {
+      margin-left: 2em;
+    }  </style>
   <link rel="stylesheet" href="site_libs/revealjs/dist/theme/quarto.css">
   <link href="site_libs/revealjs/plugin/quarto-line-highlight/line-highlight.css" rel="stylesheet">
   <link href="site_libs/revealjs/plugin/reveal-menu/menu.css" rel="stylesheet">
@@ -327,34 +413,92 @@
   <h1 class="title">A University of Edinburgh Quarto Template</h1>
 
 <div class="quarto-title-authors">
+<div class="quarto-title-author">
+<div class="quarto-title-author-name">
+Jane Bloggs <a href="https://orcid.org/0000-0000-0000-0001" class="quarto-title-author-orcid"> <img src="data:image/png;base64,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"></a>
+</div>
+<div class="quarto-title-author-email">
+<a href="mailto:jane.bloggs@ed.ac.uk">jane.bloggs@ed.ac.uk</a>
+</div>
+        <p class="quarto-title-affiliation">
+            <a href="www.ed.ac.uk">
+            Roslin Institute, University of Edinburgh
+            </a>
+          </p>
+    </div>
+<div class="quarto-title-author">
+<div class="quarto-title-author-name">
+Marie McDonald <a href="https://orcid.org/0000-0000-0000-0002" class="quarto-title-author-orcid"> <img src="data:image/png;base64,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"></a>
+</div>
+        <p class="quarto-title-affiliation">
+            <a href="www.ed.ac.uk">
+            R(D)SVS, University of Edinburgh
+            </a>
+          </p>
+    </div>
 </div>
 
 </section>
-<section id="quarto" class="slide level2">
-<h2>Quarto</h2>
-<p>Quarto enables you to weave together content and executable code into a finished presentation. To learn more about Quarto presentations see <a href="https://quarto.org/docs/presentations/" class="uri">https://quarto.org/docs/presentations/</a>.</p>
+<section id="why-use-quarto" class="slide level2">
+<h2>Why use Quarto?</h2>
+<p>Quarto enables you to weave together content and executable code into a finished presentation.</p>
+<p>To learn more about Quarto presentations see <a href="https://quarto.org/docs/presentations/" class="uri">https://quarto.org/docs/presentations/</a>.</p>
 </section>
-<section id="bullets" class="slide level2">
-<h2>Bullets</h2>
-<p>When you click the <strong>Render</strong> button a document will be generated that includes:</p>
-<ul>
-<li>Content authored with markdown</li>
-<li>Output from executable code</li>
-</ul>
+<section>
+<section id="you-can-have-sections-like-this" class="title-slide slide level1 center">
+<h1>You can have sections like this</h1>
+
+</section>
+<section id="and-important-things" class="slide level2 smaller">
+<h2>And important things:</h2>
+<div class="columns">
+<div class="column" style="width:50%;">
+<p>And citations are managed via pandoc per <span class="citation" data-cites="quartoguide23">(the <a href="#/references" role="doc-biblioref" onclick="">Guide 2023</a>)</span>.</p>
+<p>It’s also good to reference <span class="citation" data-cites="knuth84">(<a href="#/references" role="doc-biblioref" onclick="">Knuth 1984</a>)</span> for no particular reason.</p>
+</div><div class="column" style="width:50%;">
+<div class="cell">
+<div class="cell-output-display">
+<div class="quarto-figure quarto-figure-center">
+<figure>
+<p><img data-src="ed_template_files/figure-revealjs/unnamed-chunk-1-1.png" width="960"></p>
+<figcaption>A lovely chart</figcaption>
+</figure>
+</div>
+</div>
+</div>
+</div>
+</div>
 </section>
-<section id="code" class="slide level2">
-<h2>Code</h2>
-<p>When you click the <strong>Render</strong> button a presentation will be generated that includes both content and the output of embedded code. You can embed code like this:</p>
+<section id="and-other-stuff" class="slide level2">
+<h2>And other stuff</h2>
 <div class="cell">
+<div class="sourceCode cell-code" id="cb1"><pre class="sourceCode numberSource r number-lines code-with-copy"><code class="sourceCode r"><span id="cb1-1"><a href="#cb1-1"></a><span class="co"># like code obviously</span></span>
+<span id="cb1-2"><a href="#cb1-2"></a></span>
+<span id="cb1-3"><a href="#cb1-3"></a><span class="dv">3</span> <span class="sc">*</span> <span class="dv">3</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <div class="cell-output cell-output-stdout">
-<pre><code>[1] 2</code></pre>
+<pre><code>[1] 9</code></pre>
+</div>
+</div>
+<div class="footer">
+<p>A footer can be overriden when needed</p>
+</div>
+</section>
+<section id="references" class="slide level2 smaller scrollable">
+<h2>References</h2>
+<div id="refs" class="references csl-bib-body hanging-indent" role="list">
+<div id="ref-quartoguide23" class="csl-entry" role="listitem">
+Guide, Quarto. 2023. <em>Quarto Guide</em>. posit.co. <a href="https://quarto.org/docs/guide/">https://quarto.org/docs/guide/</a>.
+</div>
+<div id="ref-knuth84" class="csl-entry" role="listitem">
+Knuth, Donald E. 1984. <span>“Literate Programming.”</span> <em>Comput. J.</em> 27 (2): 97–111. <a href="https://doi.org/10.1093/comjnl/27.2.97">https://doi.org/10.1093/comjnl/27.2.97</a>.
 </div>
 </div>
 
-<div class="footer footer-default">
 
+<img src="./content/rdsvs.png" class="slide-logo r-stretch"><div class="footer footer-default">
+<p>Your social media handles - anything you want on each slide</p>
 </div>
-</section>
+</section></section>
     </div>
   </div>
 

diff --git a/docs/ed_template_files/figure-revealjs/unnamed-chunk-1-1.png b/docs/ed_template_files/figure-revealjs/unnamed-chunk-1-1.png
diff --git a/docs/search.json b/docs/search.json
@@ -1,23 +1,30 @@
 [
   {
-    "objectID": "ed_template.html#quarto",
-    "href": "ed_template.html#quarto",
+    "objectID": "ed_template.html#why-use-quarto",
+    "href": "ed_template.html#why-use-quarto",
     "title": "A University of Edinburgh Quarto Template",
-    "section": "Quarto",
-    "text": "Quarto\nQuarto enables you to weave together content and executable code into a finished presentation. To learn more about Quarto presentations see https://quarto.org/docs/presentations/."
+    "section": "Why use Quarto?",
+    "text": "Why use Quarto?\nQuarto enables you to weave together content and executable code into a finished presentation.\nTo learn more about Quarto presentations see https://quarto.org/docs/presentations/."
   },
   {
-    "objectID": "ed_template.html#bullets",
-    "href": "ed_template.html#bullets",
+    "objectID": "ed_template.html#and-important-things",
+    "href": "ed_template.html#and-important-things",
     "title": "A University of Edinburgh Quarto Template",
-    "section": "Bullets",
-    "text": "Bullets\nWhen you click the Render button a document will be generated that includes:\n\nContent authored with markdown\nOutput from executable code"
+    "section": "And important things:",
+    "text": "And important things:\n\n\nAnd citations are managed via pandoc per (the Guide 2023).\nIt’s also good to reference (Knuth 1984) for no particular reason.\n\n\n\n\n\n\nA lovely chart"
   },
   {
-    "objectID": "ed_template.html#code",
-    "href": "ed_template.html#code",
+    "objectID": "ed_template.html#and-other-stuff",
+    "href": "ed_template.html#and-other-stuff",
     "title": "A University of Edinburgh Quarto Template",
-    "section": "Code",
-    "text": "Code\nWhen you click the Render button a presentation will be generated that includes both content and the output of embedded code. You can embed code like this:\n\n\n[1] 2"
+    "section": "And other stuff",
+    "text": "And other stuff\n\n# like code obviously\n\n3 * 3\n\n[1] 9\n\n\n\nA footer can be overriden when needed"
+  },
+  {
+    "objectID": "ed_template.html#references",
+    "href": "ed_template.html#references",
+    "title": "A University of Edinburgh Quarto Template",
+    "section": "References",
+    "text": "References\n\n\nGuide, Quarto. 2023. Quarto Guide. posit.co. https://quarto.org/docs/guide/.\n\n\nKnuth, Donald E. 1984. “Literate Programming.” Comput. J. 27 (2): 97–111. https://doi.org/10.1093/comjnl/27.2.97.\n\n\n\n\n\nYour social media handles - anything you want on each slide"
   }
 ]