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1. bam-base-quality-adj bam-base-quality-adj Public

   Script to adjust base qualities of bam files

   Python

2. handlers handlers Public

   Scripts to read in files.

   Python

3. Guppy Guppy Public

   WDL

4. WDLs WDLs Public

   WDL

5. DeepSomatic_postprocess DeepSomatic_postprocess Public

   Keep track of scripts used for DeepSomatic analysis

   Python

6. titration_scripts titration_scripts Public

   Scripts to generate downsampled bams and purity titration bams using samtools.

   Shell