[object Object].removeClassFromAllLines is deprecated.

[lestermedullan]

Use decorations instead: http://blog.atom.io/2014/07/24/decorations.html

[object Object].removeClassFromAllLines (/Applications/Atom.app/Contents/Resources/app/src/editor-view.js:95:13)
AtomJsHint.updateGutter (/Users/Lester/.atom/packages/atom-jshint/lib/atom-jshint.js:175:14)
AtomJsHint.resetState (/Users/Lester/.atom/packages/atom-jshint/lib/atom-jshint.js:139:10)
AtomJsHint.run (/Users/Lester/.atom/packages/atom-jshint/lib/atom-jshint.js:95:12)
AtomJsHint.<anonymous> (/Users/Lester/.atom/packages/atom-jshint/lib/atom-jshint.js:27:16)
HTMLDivElement.jQuery.event.dispatch (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:4676:9)
HTMLDivElement.elemData.handle (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:4360:46)
Object.trigger (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:4594:12)
HTMLDivElement.<anonymous> (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:5119:17)
Function.jQuery.extend.each (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:590:23)
PaneContainerView.each (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:237:17)
PaneContainerView.trigger (/Applications/Atom.app/Contents/Resources/app/node_modules/space-pen/vendor/jquery.js:5118:15)
PaneContainerView.module.exports.PaneContainerView.onActivePaneItemChanged (/Applications/Atom.app/Contents/Resources/app/src/pane-container-view.js:87:19)
<unknown> (/Applications/Atom.app/Contents/Resources/app/src/pane-container-view.js:3:61)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:155:30)
Array.forEach (native)
Signal.emitSlow (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:154:47)
Signal.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:107:30)
Signal.emitValue (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:82:19)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/behavior.js:81:29)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:155:30)
Array.forEach (native)
Behavior.emitSlow (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:154:47)
Behavior.module.exports.Emitter.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:107:30)
Behavior.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/behavior.js:44:38)
Behavior.emitValue (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:82:19)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:252:38)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:155:30)
Array.forEach (native)
Behavior.emitSlow (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:154:47)
Behavior.module.exports.Emitter.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:107:30)
Behavior.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/behavior.js:44:38)
Behavior.emitValue (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:82:19)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:173:28)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:155:30)
Array.forEach (native)
Behavior.emitSlow (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:154:47)
Behavior.module.exports.Emitter.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/emitter.js:107:30)
Behavior.emit (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/behavior.js:44:38)
Behavior.emitValue (/Applications/Atom.app/Contents/Resources/app/node_modules/emissary/lib/signal.js:82:19)
Pane.set (/Applications/Atom.app/Contents/Resources/app/node_modules/theorist/lib/model.js:166:21)
Pane.accessor.set (/Applications/Atom.app/Contents/Resources/app/node_modules/theorist/lib/model.js:57:23)
Pane.addItem (/Applications/Atom.app/Contents/Resources/app/src/pane.js:186:25)
Pane.activateItem (/Applications/Atom.app/Contents/Resources/app/src/pane.js:171:14)
<unknown> (/Applications/Atom.app/Contents/Resources/app/src/workspace.js:252:16)
_fulfilled (/Applications/Atom.app/Contents/Resources/app/node_modules/q/q.js:787:54)
self.promiseDispatch.done (/Applications/Atom.app/Contents/Resources/app/node_modules/q/q.js:816:30)
Promise.promiseDispatch (/Applications/Atom.app/Contents/Resources/app/node_modules/q/q.js:749:13)
<unknown> (/Applications/Atom.app/Contents/Resources/app/node_modules/q/q.js:557:44)
flush (/Applications/Atom.app/Contents/Resources/app/node_modules/q/q.js:108:17)
process._tickCallback (node.js:349:11)

[Joezo]

Closing as a duplicate of #49. Also @framerate has put in #59 to address this, unfortunately i havn't had the time to fully test it yet but by all means give it a look over :) Thanks for reporting though!

[framerate]

#56