Redocumented after updating roxygen2 #137
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow builds the site, renders the codemeta data, and | |
| # then does a build check with R-CMD-check | |
| # Name (appears on badge, keep it short) | |
| name: R-CMD-check | |
| # When to run | |
| on: | |
| push: | |
| branches: | |
| - devel | |
| # Define job | |
| # What systems to run on (the matrix) | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: windows-latest, r: 'oldrel'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: windows-latest, r: 'devel'} | |
| - {os: macOS-latest, r: 'oldrel'} | |
| - {os: macOS-latest, r: 'release'} | |
| #- {os: macOS-latest, r: 'devel'} | |
| - {os: ubuntu-20.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| # Set up the environment | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| #Steps of the jobs | |
| # What things to use to complete the job | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v1 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - uses: r-lib/actions/setup-pandoc@v1 | |
| #Add dependencies | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
| shell: Rscript {0} | |
| #Windows | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| #System dependencies for linux | |
| - name: Install system dependencies for Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| while read -r cmd | |
| do | |
| eval sudo $cmd | |
| done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
| #Add quartz for macOS only | |
| - name: Install XQuartz for macOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| wget https://github.com/XQuartz/XQuartz/releases/download/XQuartz-2.7.11/XQuartz-2.7.11.dmg | |
| sudo hdiutil attach XQuartz-2.7.11.dmg | |
| sudo installer -package /Volumes/XQuartz-2.7.11/XQuartz.pkg -target / | |
| #R script to install rcmdcheck and Rage | |
| - name: Install dependencies, rcmdcheck, Rage | |
| run: | | |
| remotes::install_deps(dependencies = TRUE, force = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| remotes::install_github("jonesor/Rage") #in suggests | |
| shell: Rscript {0} | |
| #R script to build the site | |
| - name: Build the site (on macOS, and latest release R version) | |
| if: matrix.config.os == 'macOS-latest' && matrix.config.r == 'release' | |
| run: | | |
| install.packages("textshaping",type = "binary",dependencies = TRUE) | |
| install.packages("devtools") | |
| devtools::install(pkg = ".", dependencies = TRUE) | |
| install.packages("rmarkdown",dependencies = TRUE) | |
| rmarkdown::render(input = "README.Rmd","github_document",clean = TRUE) | |
| unlink("README.html") | |
| install.packages("pkgdown", dependencies = TRUE) | |
| pkgdown::build_site() | |
| install.packages("digest",dependencies = TRUE) | |
| # ## install.packages("codemetar", dependencies = TRUE) | |
| # ## codemetar::write_codemeta() | |
| shell: Rscript {0} | |
| #Commit changes to the codemeta, site and README. | |
| #Need only run on macOS-latest with release version of R | |
| - name: Commit results | |
| if: matrix.config.os == 'macOS-latest' && matrix.config.r == 'release' | |
| #if: "!contains(github.event.head_commit.message, 'cm-skip')" | |
| run: | | |
| git add codemeta.json | |
| git add docs/ | |
| git add README.md | |
| git commit -m 'Re-build site, codemeta.json and README' || echo "No changes to commit" | |
| git push https://${{github.actor}}:${{secrets.GITHUB_TOKEN}}@github.com/${{github.repository}}.git HEAD:${{ github.ref }} || echo "No changes to commit" | |
| - name: Session info | |
| run: | | |
| options(width = 100) | |
| sessionInfo() | |
| shell: Rscript {0} | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
| #run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--ignore-vignettes"), build_args = c("--no-build-vignettes"), error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |