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Two users have reported that Plastid passes installation, but fails during runtime on OSX. This appears to be conda-independent, and occurs even when installing inside virtualenv. After a successful install, import plastid yields:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Users/username/env/lib/python2.7/site-packages/plastid/__init__.py", line 40, in <module>
from plastid.genomics.roitools import (GenomicSegment,
ImportError: dlopen(/Users/username/env/lib/python2.7/site-packages/plastid/genomics/roitools.so, 2): Library not loaded: @rpath/pysam/libctabixproxies.so
Referenced from: /Users/username/env/lib/python2.7/site-packages/plastid/genomics/roitools.so
Reason: image not found
Collecting more information
The text was updated successfully, but these errors were encountered:
Looking into this a bit, it seems like clang is making dynamically-linked libraries, which is weird because on Linux GCC makes static libs for all of Plastid's extensions.
Two users have reported that Plastid passes installation, but fails during runtime on OSX. This appears to be conda-independent, and occurs even when installing inside
virtualenv
. After a successful install,import plastid
yields:Collecting more information
The text was updated successfully, but these errors were encountered: