Source code for the paper A New Approach for Evaluating and Improving the Performance of Segmentation Algorithms on Hard-to-Detect Blood Vessels by João Pedro Parella, Matheus Viana da Silva and Cesar Henrique Comin.
The script vessel_salience/salience.py
can be used for calculating the local vessel salience (LVS) index and the low-salience recall (LSRecall) using the API functions lvs
and ls_recall
.
The script vessel_salience/augmentation.py
can be used for augmenting blood vessel segments using the function create_image
.
Required packages are indicated in the file requirements.txt
.
The Jupyter notebooks in the folder notebooks
show examples for running the scripts. They are still a work in progress but show basic functionality.