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NMT_Bioinformatics_2022
NMT_Bioinformatics_2022 PublicGitHub landing page for all things Bioinformatics at New Mexico Tech, 2022
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NMT_Bioinformatics
NMT_Bioinformatics PublicGitHub Repository for all things Bioinformatics at NMT
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teaching_resources
teaching_resources PublicA repository for teaching resources that I've developed
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grabContigs
grabContigs PublicTakes a sequence list file (one sequence per line) and an assembly in fasta format as input and outputs a fasta file containing only the sequences present in the list file.
Python
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strappyMcBootClade
strappyMcBootClade PublicThe goal of this program is to provide similar functions as DNAsp for Unix based operating systems (e.g., OSX). strappyMcBootClade also offers the ability to estimate population genetic parameters …
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fastqInterleaver
fastqInterleaver PublicTakes two fastq read files as input (preferably paired-end reads) and interleaves them.
Python
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