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  1. FlowAnalysis FlowAnalysis Public

    This repository contains scripts to analyze exported .fcs files from flow cytometry data.

    MATLAB

  2. Influx-custom-gates Influx-custom-gates Public

    The scripts contained are used to draw the custom binning gates using .xml configuration files from the BD Influx cell sorter. This script is not compatible with the FACSAria sorters.

    MATLAB

  3. processFASTQ processFASTQ Public

    This repository contains scripts for parsing FASTQ files from Illumina sequencing runs into a demultiplexed .csv file for downstream analysis.

    Jupyter Notebook

  4. Ribozyme-FACS-seq Ribozyme-FACS-seq Public

    This repository contains the scripts used to analyze demultiplexed sequencing file to generate results from FACS-seq experiments for measuring the fluorescent reporter activity of ribozymes and rib…

    MATLAB

  5. Ribozyme-RNA-seq Ribozyme-RNA-seq Public

    This repository contains the scripts used to analyze demultiplexed sequencing file to generate results from RNA-seq experiments for measuring the activity of ribozymes and ribozyme switches in mam…

    MATLAB

  6. Ribozyme-SeqFun Ribozyme-SeqFun Public

    This repository contain scripts to analyze sequence and structural motifs.

    Jupyter Notebook