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de novo sequence assembler using string graphs
C++ C Python Other
Latest commit 2ab3eae Jan 12, 2016 @jts Merge pull request #103 from mr-c/patch-1
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README.md

SGA - String Graph Assembler

SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.


For installation and usage instructions see src/README

For running examples see src/examples and the sga wiki

For questions or support contact jared.simpson --at-- oicr.on.ca

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